RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	PDE1C	Q14123	709 aa	Predicted RBP	11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	IRF4	Q15306	451 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	WSCD2	Q2TBF2	565 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	MARC1	Q5VT66	337 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	UNQ6494/PRO21346	Q6UXR6	183 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	PARG	Q86W56	976 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	TEX26	Q8N6G2	289 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	MAML1	Q92585	1016 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	IFT43	Q96FT9	208 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	MRFAP1L1	Q96HT8	127 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	CNDP2	Q96KP4	475 aa	Known RBP	11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	C1QTNF7	Q9BXJ2	289 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	DNAJC28	Q9NX36	388 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	KLF15	Q9UIH9	416 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	MSRB2	Q9Y3D2	182 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	HYOU1	Q9Y4L1	999 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	PCDHGC4	Q9Y5F7	938 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	CFAP47	Q6ZTR5	3102 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	ZNF487	B1APH4	448 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	SOCS5	O75159	536 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	LCA5L	O95447	670 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	CSF2	P04141	144 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	GIMD1	P0DJR0	217 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	NME1	P15531	152 aa	Known RBP	11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	FECH	P22830	423 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	ACADVL	P49748	655 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	SLC10A2	Q12908	348 aa	Predicted RBP	11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	TRAF2	Q12933	501 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	EIF2B5	Q13144	721 aa	Known RBP	11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	DNAJC3	Q13217	504 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	LRRC14	Q15048	493 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	PROX2	Q3B8N5	592 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	CCDC157	Q569K6	752 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	ZFYVE27	Q5T4F4	411 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	LRRC38	Q5VT99	294 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	DPPA4	Q7L190	304 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	BBS5	Q8N3I7	341 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	PLD5	Q8N7P1	536 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	LRRN4	Q8WUT4	740 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	NSMCE1	Q8WV22	266 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	FATE1	Q969F0	183 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	TSGA13	Q96PP4	275 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	RNF157	Q96PX1	679 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	NT5M	Q9NPB1	228 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	SCUBE2	Q9NQ36	999 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	DTL	Q9NZJ0	730 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	CHD6	Q8TD26	2715 aa		11.83	□□□□□ -0.52
PSMC3-205	ENST00000528362	AKAP13	Q12802	2813 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	CFAP69	A5D8W1	941 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	MATN3	O15232	486 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	FFAR2	O15552	330 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	SIGLEC6	O43699	453 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	CP	P00450	1065 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	KRT1	P04264	644 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	GM2A	P17900	193 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	COMT	P21964	271 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	SLC1A1	P43005	524 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	MAGEA1	P43355	309 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	HADHB	P55084	474 aa	Known RBP	11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	ZNF211	Q13398	564 aa	Predicted RBP	11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	IHH	Q14623	411 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	AGER	Q15109	404 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	IFI16	Q16666	785 aa	Known RBP	11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	ST3GAL2	Q16842	350 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	RALGPS1	Q5JS13	557 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	ALG1L	Q6GMV1	187 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	TIGD7	Q6NT04	549 aa	Predicted RBP	11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	DHRS13	Q6UX07	377 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	LIPI	Q6XZB0	460 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	TMPRSS7	Q7RTY8	843 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	VSIG1	Q86XK7	387 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	CCDC170	Q8IYT3	715 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	PAF1	Q8N7H5	531 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	OR4C6	Q8NH72	309 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	PANX2	Q96RD6	677 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	B4GALT6	Q9UBX8	382 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	TFR2	Q9UP52	801 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	PCDHGA1	Q9Y5H4	931 aa		11.82	□□□□□ -0.52
PSMC3-205	ENST00000528362	IGF2R	P11717	2491 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	SOWAHD	A6NJG2	315 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362		A8MX80	341 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	TOR1B	O14657	336 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	SCAMP1	O15126	338 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	LZTS3	O60299	673 aa	Predicted RBP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	RFPL3	O75679	317 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	NEBL	O76041	1014 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	RECQL5	O94762	991 aa	Predicted RBP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	PGLS	O95336	258 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	PCCB	P05166	539 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	PROS1	P07225	676 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	ELFN1	P0C7U0	828 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	JUND	P17535	347 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	CKMT2	P17540	419 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	MX2	P20592	715 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	CCNC	P24863	283 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	THOP1	P52888	689 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms