RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 LINC01547P58512 204 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-210ENST00000525878 SLC18A3Q16572 532 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 SOWAHAQ2M3V2 549 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 CBWD5Q5RIA9 395 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 TOGARAM2Q6ZUX3 1019 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 SLC26A9Q7LBE3 791 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 DSG4Q86SJ6 1040 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 OR13A1Q8NGR1 328 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 HSPH1Q92598 858 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 SDCCAG3Q96C92 435 aa4.03□□□□□ -1.76
CSDE1-210ENST00000525878 TTC12Q9H892 705 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-210ENST00000525878 ATXN2Q99700 1313 aaKnown RBP4.02□□□□□ -1.77
CSDE1-210ENST00000525878 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 A0A0U1RQF3 1178 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 HMX3A6NHT5 357 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 DHX16O60231 1041 aaKnown RBP4.02□□□□□ -1.77
CSDE1-210ENST00000525878 FAM155BO75949 473 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 TBX6O95947 436 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-210ENST00000525878 CSTBP04080 98 aaKnown RBP4.02□□□□□ -1.77
CSDE1-210ENST00000525878 SETSIPP0DME0 302 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 HLA-DOBP13765 273 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 TMEM30BQ3MIR4 351 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 PAPPA-AS1Q5QFB9 102 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 PRSS45Q7RTY3 260 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 NFE4Q86UQ8 179 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 DNAAF1Q8NEP3 725 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 SVIPQ8NHG7 77 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 GOLGA1Q92805 767 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 OTULINQ96BN8 352 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 KCNS2Q9ULS6 477 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 CDC14AQ9UNH5 594 aa4.02□□□□□ -1.77
CSDE1-210ENST00000525878 LILRA5A6NI73 299 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 SOCS6O14544 535 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 PLRG1O43660 514 aaKnown RBP4.01□□□□□ -1.77
CSDE1-210ENST00000525878 NDUFB4O95168 129 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 RNF224P0DH78 156 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 GPTP24298 496 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 SLC20A2Q08357 652 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 ESCO2Q56NI9 601 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 DENND1BQ6P3S1 775 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 IL20RBQ6UXL0 311 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 SLC9B2Q86UD5 537 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 CHD1LQ86WJ1 897 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 KCNH5Q8NCM2 988 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 GDPD5Q8WTR4 605 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 ERGIC1Q969X5 290 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 CLSTN3Q9BQT9 956 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 CRB3Q9BUF7 120 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 DDX43Q9NXZ2 648 aaKnown RBP4.01□□□□□ -1.77
CSDE1-210ENST00000525878 NFE2L3Q9Y4A8 694 aa4.01□□□□□ -1.77
CSDE1-210ENST00000525878 GREB1LQ9C091 1923 aaPredicted RBP4□□□□□ -1.77
CSDE1-210ENST00000525878 ABHD14A-ACY1A0A1B0GW23 586 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 ASPDHA6ND91 283 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 IPO5O00410 1097 aaKnown RBP4□□□□□ -1.77
CSDE1-210ENST00000525878 CHRM4P08173 479 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 ZNF8P17098 575 aaPredicted RBP4□□□□□ -1.77
CSDE1-210ENST00000525878 CHATP28329 748 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 HDAC4P56524 1084 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 RELQ04864 619 aaPredicted RBP4□□□□□ -1.77
CSDE1-210ENST00000525878 GOLGA8FQ08AF8 430 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 CCNI2Q6ZMN8 369 aaPredicted RBP4□□□□□ -1.77
CSDE1-210ENST00000525878 DBF4BQ8NFT6 615 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 FAM76AQ8TAV0 307 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 TAS1R2Q8TE23 839 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 ABCF3Q9NUQ8 709 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 PSAT1Q9Y617 370 aa4□□□□□ -1.77
CSDE1-210ENST00000525878 HSPB2A8KAH6 182 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 KLRF2D3W0D1 207 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 PRC1O43663 620 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 ATP2C2O75185 946 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 CDH1P12830 882 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 KRT5P13647 590 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 STX2P32856 288 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 BLKP51451 505 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 PITX1P78337 314 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-210ENST00000525878 PMP22Q01453 160 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 CUL4BQ13620 913 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 HSPB2Q16082 182 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 CCSAPQ6IQ19 270 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-210ENST00000525878 GFRALQ6UXV0 394 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 TMEM219Q86XT9 240 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 CHERPQ8IWX8 916 aaKnown RBP3.99□□□□□ -1.77
CSDE1-210ENST00000525878 PARP16Q8N5Y8 322 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 DMBX1Q8NFW5 382 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 GRAPLQ8TC17 118 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-210ENST00000525878 THAP4Q8WY91 577 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 RBM17Q96I25 401 aaKnown RBP3.99□□□□□ -1.77
CSDE1-210ENST00000525878 LITAFQ99732 161 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 CSTL1Q9H114 145 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 PCDH9Q9HC56 1237 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 A3GALT2U3KPV4 340 aa3.99□□□□□ -1.77
CSDE1-210ENST00000525878 C17orf113A0A1B0GUU1 675 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 TYW5A2RUC4 315 aaKnown RBP3.98□□□□□ -1.77
CSDE1-210ENST00000525878 ZNF500O60304 480 aaPredicted RBP3.98□□□□□ -1.77
CSDE1-210ENST00000525878 PTPN2P17706 415 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 HTR3AP46098 478 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 FAM83BQ5T0W9 1011 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 ARHGAP17Q68EM7 881 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 JMJD6Q6NYC1 403 aaPredicted RBP3.98□□□□□ -1.77
CSDE1-210ENST00000525878 WDR73Q6P4I2 378 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms