RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 PDK1Q15118 436 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 TRIP6Q15654 476 aaKnown RBP21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 ODF2Q5BJF6 829 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 RAD9BQ6WBX8 426 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 ZSWIM9Q86XI8 627 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 TPCN2Q8NHX9 752 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 KLK6Q92876 244 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 OLFM3Q96PB7 478 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 NOD2Q9HC29 1040 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 KCTD5Q9NXV2 234 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 REXO2Q9Y3B8 237 aaKnown RBP21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 PCDHB9Q9Y5E1 797 aa21.04■□□□□ 0.96
TRAPPC9-215ENST00000524162 KRT1P04264 644 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 CCNB1P14635 433 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 CDKN2BP42772 138 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 Q6ZSR6 202 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 DPPA4Q7L190 304 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 KANSL1Q7Z3B3 1105 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 RCOR2Q8IZ40 523 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 OR13H1Q8NG92 308 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 SETD7Q8WTS6 366 aaKnown RBP21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 UBE2Q2Q8WVN8 375 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 NSMCE3Q96MG7 304 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 PHTF1Q9UMS5 762 aa21.03■□□□□ 0.96
TRAPPC9-215ENST00000524162 SPTY2D1-AS1A0A0U1RR47 76 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 POM121BA6NF01 834 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 KCNK3O14649 394 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 RAD51BO15315 384 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 MMP20O60882 483 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 ZRANB2O95218 330 aaKnown RBP eCLIP21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 PEX5P50542 639 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 GSDMDP57764 484 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 COPS2P61201 443 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 IFI35P80217 286 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 SIM1P81133 766 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 CCDC13Q8IYE1 715 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 SLC22A18ASQ8N1D0 253 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 EXD1Q8NHP7 514 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 RHBDD1Q8TEB9 315 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 IL12RB2Q99665 862 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 FZD3Q9NPG1 666 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 SALL4Q9UJQ4 1053 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 CA5BQ9Y2D0 317 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 EFR3BQ9Y2G0 817 aa21.02■□□□□ 0.96
TRAPPC9-215ENST00000524162 RCCD1A6NED2 376 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 PPP1R12AO14974 1030 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 FZD6O60353 706 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 DKK1O94907 266 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 PGLSO95336 258 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 CLDN2P57739 230 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 PTK2BQ14289 1009 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 PPP2R5EQ16537 467 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 TFDP3Q5H9I0 405 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 MFSD7Q6UXD7 560 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 DAAM2Q86T65 1068 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 RAVER1Q8IY67 606 aaKnown RBP21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 NDUFAF2Q8N183 169 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 TP53I13Q8NBR0 393 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 RNF25Q96BH1 459 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 RBM41Q96IZ5 413 aaKnown RBP21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 MCCC1Q96RQ3 725 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 NT5MQ9NPB1 228 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 RBM22Q9NW64 420 aaKnown RBP eCLIP21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 WASF3Q9UPY6 502 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 PCDHGC4Q9Y5F7 938 aa21.01■□□□□ 0.95
TRAPPC9-215ENST00000524162 PSMD11O00231 422 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 TNFSF14O43557 240 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 ITGAVP06756 1048 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 KRT10P13645 584 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 C6P13671 934 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 TGM2P21980 687 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 CA4P22748 312 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 CTNNA1P35221 906 aaKnown RBP21■□□□□ 0.95
TRAPPC9-215ENST00000524162 LIG3P49916 1009 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 RPL26P61254 145 aaKnown RBP21■□□□□ 0.95
TRAPPC9-215ENST00000524162 RALGDSQ12967 914 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 LRRC14Q15048 493 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 LRRC73Q5JTD7 316 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 ARMC12Q5T9G4 340 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 LIPIQ6XZB0 460 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 SPOCD1Q6ZMY3 1216 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 PTAR1Q7Z6K3 402 aaPredicted RBP21■□□□□ 0.95
TRAPPC9-215ENST00000524162 PARGQ86W56 976 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 CBARPQ8N350 705 aaPredicted RBP21■□□□□ 0.95
TRAPPC9-215ENST00000524162 SCRN2Q96FV2 425 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 TBATAQ96M53 351 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 CAMK1GQ96NX5 476 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 SEMA3CQ99985 751 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 WRAP53Q9BUR4 548 aaKnown RBP21■□□□□ 0.95
TRAPPC9-215ENST00000524162 LACRTQ9GZZ8 138 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 RPL26L1Q9UNX3 145 aaKnown RBP21■□□□□ 0.95
TRAPPC9-215ENST00000524162 APOBEC2Q9Y235 224 aaKnown RBP21■□□□□ 0.95
TRAPPC9-215ENST00000524162 HYOU1Q9Y4L1 999 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 PCDHA3Q9Y5H8 950 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 HEY1Q9Y5J3 304 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 SPEGQ15772 3267 aa21■□□□□ 0.95
TRAPPC9-215ENST00000524162 CCDC66A2RUB6 948 aa20.99■□□□□ 0.95
TRAPPC9-215ENST00000524162 CSF2P04141 144 aa20.99■□□□□ 0.95
TRAPPC9-215ENST00000524162 NME1P15531 152 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms