RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ABHD17AQ96GS6 310 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 TAAR9Q96RI9 348 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 NPY6RQ99463 290 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CTRCQ99895 268 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 NCAPGQ9BPX3 1015 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
SDCBP-211ENST00000523441 TMEM168Q9H0V1 697 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 PDCL3Q9H2J4 239 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CYP4F12Q9HCS2 524 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 SLC39A1Q9NY26 324 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 STAP1Q9ULZ2 295 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 SRPK3Q9UPE1 567 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 B3GALT1Q9Y5Z6 326 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CACNA1DQ01668 2161 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CREBBPQ92793 2442 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 TMEM202A6NGA9 273 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 PRR19A6NJB7 356 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 ZNF891A8MT65 544 aaPredicted RBP11.73□□□□□ -0.53
SDCBP-211ENST00000523441 INSIG1O15503 277 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 BUB1O43683 1085 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 RAD1O60671 282 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 PIGNO95427 931 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 POP4O95707 220 aaKnown RBP11.73□□□□□ -0.53
SDCBP-211ENST00000523441 CPNE6O95741 557 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 PNMA6AP0CW24 399 aaPredicted RBP11.73□□□□□ -0.53
SDCBP-211ENST00000523441 STX17P56962 302 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 SNAP47Q5SQN1 464 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 FAM102AQ5T9C2 384 aaPredicted RBP11.73□□□□□ -0.53
SDCBP-211ENST00000523441 IRF2BP1Q8IU81 584 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 SMARCE1Q969G3 411 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 RBM15Q96T37 977 aaKnown RBP eCLIP11.73□□□□□ -0.53
SDCBP-211ENST00000523441 MAGEB5Q9BZ81 275 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 GPN2Q9H9Y4 310 aaPredicted RBP11.73□□□□□ -0.53
SDCBP-211ENST00000523441 FGF22Q9HCT0 170 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 APPL1Q9UKG1 709 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 HPCAL4Q9UM19 191 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 CENPEQ02224 2701 aa11.73□□□□□ -0.53
SDCBP-211ENST00000523441 TNRC6AQ8NDV7 1962 aaKnown RBP11.72□□□□□ -0.53
SDCBP-211ENST00000523441 IGHV5-10-1A0A0J9YXX1 117 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 ENO4A6NNW6 628 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 EFCAB7A8K855 629 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 TMEM110-MUSTN1A8MSY1 372 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 A8MU76 341 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 BECN2A8MW95 431 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 A8MX80 341 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 PSMA7O14818 248 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 TEX33O43247 280 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 GSRP00390 522 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
SDCBP-211ENST00000523441 CSTF2P33240 577 aaKnown RBP eCLIP11.72□□□□□ -0.53
SDCBP-211ENST00000523441 KRT9P35527 623 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 LIG3P49916 1009 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 PEX5P50542 639 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 RHOAP61586 193 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 ATP11AP98196 1134 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 B4GALNT1Q00973 533 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 STIM1Q13586 685 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 HLTFQ14527 1009 aaKnown RBP eCLIP11.72□□□□□ -0.53
SDCBP-211ENST00000523441 CDO1Q16878 200 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 LACTB2Q53H82 288 aaPredicted RBP11.72□□□□□ -0.53
SDCBP-211ENST00000523441 RAB6CQ53S08 254 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 CFAP58Q5T655 872 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 SLC26A9Q7LBE3 791 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 KDELC2Q7Z4H8 507 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 HSCBQ8IWL3 235 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 ATL2Q8NHH9 583 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 PATE1Q8WXA2 126 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 ARHGEF2Q92974 986 aaKnown RBP11.72□□□□□ -0.53
SDCBP-211ENST00000523441 MIB2Q96AX9 1013 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 CFAP57Q96MR6 1250 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 GDAP1L1Q96MZ0 367 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 OSBPL1AQ9BXW6 950 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 RAB6CQ9H0N0 254 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 SPATS2LQ9NUQ6 558 aaKnown RBP11.72□□□□□ -0.53
SDCBP-211ENST00000523441 OCIAD1Q9NX40 245 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 CNTN6Q9UQ52 1028 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 CTNND2Q9UQB3 1225 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
SDCBP-211ENST00000523441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.72□□□□□ -0.53
SDCBP-211ENST00000523441 IGLV3-10A0A075B6K4 115 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 FAM237AA0A1B0GTK4 181 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 K7EM74 188 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 CACNB4O00305 520 aaPredicted RBP11.71□□□□□ -0.53
SDCBP-211ENST00000523441 P4HA2O15460 535 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 TMCC1O94876 653 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 IGSF6O95976 241 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 GNLYP22749 145 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 COL8A1P27658 744 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 OAS2P29728 719 aaKnown RBP11.71□□□□□ -0.53
SDCBP-211ENST00000523441 RAD51Q06609 339 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 CDC20Q12834 499 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 ANKS6Q68DC2 871 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 ZNF783Q6ZMS7 281 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 ZNF761Q86XN6 746 aaPredicted RBP11.71□□□□□ -0.53
SDCBP-211ENST00000523441 TEX19Q8NA77 164 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 CCDC112Q8NEF3 446 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 OR56A4Q8NGH8 313 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 ZDHHC1Q8WTX9 485 aa11.71□□□□□ -0.53
SDCBP-211ENST00000523441 FUBP1Q96AE4 644 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms