RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 TDRD1Q9BXT4 1180 aaKnown RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 CPEB1Q9BZB8 566 aaKnown RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 NEUROG2Q9H2A3 272 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 ATP13A3Q9H7F0 1226 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 ANKZF1Q9H8Y5 726 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.44■□□□□ 0.06
LSM1-203ENST00000520755 MBD1Q9UIS9 605 aaPredicted RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 SNX24Q9Y343 169 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 V9GYY5 206 aaPredicted RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 DOCK9Q9BZ29 2069 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 ABCA7Q8IZY2 2146 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 HTRA2O43464 458 aaPredicted RBP15.43■□□□□ 0.06
LSM1-203ENST00000520755 FZD6O60353 706 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 NDUFS2O75306 463 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 PMPCBO75439 489 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 AP2A1O95782 977 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 PRLP01236 227 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 IGLV3-19P01714 112 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 SERPINF2P08697 491 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 TPSB2P20231 275 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 ITGB7P26010 798 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 SERPINA4P29622 427 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 ACSL1P33121 698 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 ADCY8P40145 1251 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 GEMP55040 296 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 WNT3AP56704 352 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 GUCY2DQ02846 1103 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 MPP3Q13368 585 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 SIM2Q14190 667 aaPredicted RBP15.43■□□□□ 0.06
LSM1-203ENST00000520755 SPARCL1Q14515 664 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 TPSAB1Q15661 275 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 CFAP58Q5T655 872 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 ZDHHC24Q6UX98 284 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 SLC36A4Q6YBV0 504 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 ERN2Q76MJ5 926 aaKnown RBP15.43■□□□□ 0.06
LSM1-203ENST00000520755 PARS2Q7L3T8 475 aaKnown RBP15.43■□□□□ 0.06
LSM1-203ENST00000520755 DEFB119Q8N690 84 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 NAT8LQ8N9F0 302 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 IPMKQ8NFU5 416 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 ECHDC3Q96DC8 303 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 SNF8Q96H20 258 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 GPR174Q9BXC1 333 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 BTBD1Q9H0C5 482 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 RAB17Q9H0T7 212 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 SUV39H2Q9H5I1 410 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 EIF2B3Q9NR50 452 aaKnown RBP15.43■□□□□ 0.06
LSM1-203ENST00000520755 VPS45Q9NRW7 570 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 FAM153AQ9UHL3 310 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 FZD4Q9ULV1 537 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 PCDHGC4Q9Y5F7 938 aa15.43■□□□□ 0.06
LSM1-203ENST00000520755 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 FAM47DPA6NHR8 397 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 C16orf96A6NNT2 1141 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 SOCS5O75159 536 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 USP12O75317 370 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 ANXA9O76027 345 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 APRTP07741 180 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 PDHA1P08559 390 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 ATXN1LP0C7T5 689 aaKnown RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 CES1P23141 567 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 ECHS1P30084 290 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 GRIA1P42261 906 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 NEK3P51956 506 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 ITGA8P53708 1063 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 RPL6Q02878 288 aaKnown RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 NAA30Q147X3 362 aaPredicted RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 PCSK7Q16549 785 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 LPAL2Q16609 132 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 LRRC73Q5JTD7 316 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 PIP5KL1Q5T9C9 394 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 AGBL4Q5VU57 503 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 HIBCHQ6NVY1 386 aaPredicted RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 FBXL19Q6PCT2 694 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 OR14C36Q8NHC7 312 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 PDCD6IPQ8WUM4 868 aaKnown RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 LRRC45Q96CN5 670 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 ZNF641Q96N77 438 aaPredicted RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 FICDQ9BVA6 458 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 SGK2Q9HBY8 427 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 WSB2Q9NYS7 404 aaPredicted RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 TPX2Q9ULW0 747 aaKnown RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 UTP11Q9Y3A2 253 aaKnown RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 RAI2Q9Y5P3 530 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 USP34Q70CQ2 3546 aa15.42■□□□□ 0.06
LSM1-203ENST00000520755 TNRC6BQ9UPQ9 1833 aaKnown RBP15.42■□□□□ 0.06
LSM1-203ENST00000520755 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 TSPAN11A1L157 253 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 PRR23AA6NEV1 266 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 SUN1O94901 812 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 SEMA4FO95754 770 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 ADRB3P13945 408 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 CHRNA4P43681 627 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 ADPRHP54922 357 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 CCDC15Q0P6D6 951 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 PRPSAP1Q14558 356 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 ERCC6LQ2NKX8 1250 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 DENND5AQ6IQ26 1287 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 C11orf74Q86VG3 221 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 PPIL6Q8IXY8 311 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 TMEFF1Q8IYR6 380 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms