RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 SLC1A1P43005 524 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 SNRPD1P62314 119 aaKnown RBP14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 RPS21P63220 83 aaKnown RBP14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 OVGP1Q12889 678 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 TARDBPQ13148 414 aaKnown RBP eCLIP14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 TCEA2Q15560 299 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 INAVAQ3KP66 663 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 KIAA1161Q6NSJ0 714 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 KYAT3Q6YP21 454 aaKnown RBP14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 KCTD6Q8NC69 237 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 TPCN2Q8NHX9 752 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 PCDH19Q8TAB3 1148 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 ANP32BQ92688 251 aaKnown RBP14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 CENPTQ96BT3 561 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 FEM1CQ96JP0 617 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 GDAP1L1Q96MZ0 367 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 HPCAL4Q9UM19 191 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 COL27A1Q8IZC6 1860 aaPredicted RBP14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 KNTC1P50748 2209 aa14.29□□□□□ -0.12
TSNARE1-203ENST00000518928 C3orf70A6NLC5 250 aaPredicted RBP14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 BTNL10A8MVZ5 291 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 SCAMP1O15126 338 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 YKT6O15498 198 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 PRAMEF11O60813 436 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 TNNT1P13805 278 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 CKMT2P17540 419 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 KDELR1P24390 212 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 ADAMTS20P59510 1910 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 INSM1Q01101 510 aaPredicted RBP14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 PDE1CQ14123 709 aaPredicted RBP14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 PDK2Q15119 407 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 ANKRD20A8PQ5CZ79 823 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 LRRC38Q5VT99 294 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 TTC7BQ86TV6 843 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 CAMK1DQ8IU85 385 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 LRRC8AQ8IWT6 810 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 TSEN2Q8NCE0 465 aaKnown RBP14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 ZNF548Q8NEK5 533 aaPredicted RBP14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 OR4C6Q8NH72 309 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 HNRNPLLQ8WVV9 542 aaKnown RBP14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 FAF2Q96CS3 445 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 DONSONQ9NYP3 566 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 RCOR3Q9P2K3 495 aaPredicted RBP14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 TRIM10Q9UDY6 481 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 PCDHGA1Q9Y5H4 931 aa14.28□□□□□ -0.12
TSNARE1-203ENST00000518928 CACNA1GO43497 2377 aa14.27□□□□□ -0.12
TSNARE1-203ENST00000518928 SPTY2D1-AS1A0A0U1RR47 76 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 ZSCAN5CA6NGD5 496 aaPredicted RBP14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 ARHGAP42A6NI28 874 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 K7ESM1 405 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 DFFAO00273 331 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 NEMP1O14524 444 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 SPOPO43791 374 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 GCATO75600 419 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 PFN3P60673 137 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 C1orf61Q13536 156 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 PTPRRQ15256 657 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 IRF4Q15306 451 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 COL28A1Q2UY09 1125 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 FAM182AQ5T1J6 154 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 ZFYVE27Q5T4F4 411 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 KIAA1328Q86T90 577 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 RHOT1Q8IXI2 618 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 PELI3Q8N2H9 469 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 GALNT15Q8N3T1 639 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 OXR1Q8N573 874 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 LZTR1Q8N653 840 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 PQLC3Q8N755 202 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 TP53I13Q8NBR0 393 aaPredicted RBP14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 APOLD1Q96LR9 279 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 ZNF670Q9BS34 389 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 UBA2Q9UBT2 640 aaPredicted RBP14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 LHX6Q9UPM6 363 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 PCDHB1Q9Y5F3 818 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 HS3ST3A1Q9Y663 406 aa14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 SMG1Q96Q15 3661 aaKnown RBP14.27□□□□□ -0.13
TSNARE1-203ENST00000518928 URB1O60287 2271 aaKnown RBP14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 ASXL3Q9C0F0 2248 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 SHROOM3Q8TF72 1996 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 LRRD1A4D1F6 860 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 TSPAN6O43657 245 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 TLX3O43711 291 aaPredicted RBP14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 MAGEC1O60732 1142 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 IGSF6O95976 241 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 CSF2P04141 144 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 NME1P15531 152 aaKnown RBP14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 ACP1P24666 158 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 MARCKSL1P49006 195 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 GEMIN4P57678 1058 aaKnown RBP14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 ZNF211Q13398 564 aaPredicted RBP14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 DEFB133Q30KQ1 61 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 INO80DQ53TQ3 878 aaPredicted RBP14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 NCBP2-AS2Q69YL0 99 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 C11orf63Q6NUN7 778 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 TMPRSS12Q86WS5 348 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 MAP7D3Q8IWC1 876 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 RNF25Q96BH1 459 aaPredicted RBP14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 LRIG1Q96JA1 1093 aa14.26□□□□□ -0.13
TSNARE1-203ENST00000518928 LENG8Q96PV6 779 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms