RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 SGCGQ13326 291 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 XRCC4Q13426 336 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 FGL2Q14314 439 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 NOMO1Q15155 1222 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 TMEM52BQ4KMG9 183 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 TEX44Q53QW1 395 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 NAPEPLDQ6IQ20 393 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 ERAP2Q6P179 960 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 ADAT2Q7Z6V5 191 aaKnown RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 REXO1L1PQ8IX06 675 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 TRIM58Q8NG06 486 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 CXorf40AQ8TE69 158 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 WRAP53Q9BUR4 548 aaKnown RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 EDEM2Q9BV94 578 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 FZD3Q9NPG1 666 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 TRMT1Q9NXH9 659 aaKnown RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 RALGAPA1Q6GYQ0 2036 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 A0A1W2PQ67 120 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 A8MX80 341 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 CDX4O14627 284 aaPredicted RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 ZSCAN12O43309 604 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 WNT1P04628 370 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 SYPP08247 313 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 PDHA1P08559 390 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 PTPN3P26045 913 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 CD38P28907 300 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 BNC1Q01954 994 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 STAT4Q14765 748 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 SLC45A4Q5BKX6 768 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 ARMC12Q5T9G4 340 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 OR2I1PQ8NGU4 316 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 HTR3CQ8WXA8 447 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 QKIQ96PU8 341 aaKnown RBP eCLIP14.05□□□□□ -0.16
USP46-209ENST00000514536 C1QTNF2Q9BXJ5 285 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 TNRC6BQ9UPQ9 1833 aaKnown RBP14.04□□□□□ -0.16
USP46-209ENST00000514536 SHROOM3Q8TF72 1996 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 DNAH14Q0VDD8 3507 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 A0A1W2PR77 199 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 TCRBV7S2A1N4TA0A589 114 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 GOLGA6L9A6NEM1 432 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 C4orf47A7E2U8 309 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 VILLO15195 856 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 MTSS1O43312 755 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 PGLSO95336 258 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 CPP00450 1065 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 MMP2P08253 660 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 HNRNPA2B1P22626 353 aaKnown RBP14.04□□□□□ -0.16
USP46-209ENST00000514536 RBL1P28749 1068 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 AKT2P31751 481 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 CD86P42081 329 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 GRIA4P48058 902 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 EIF3EP60228 445 aaKnown RBP14.04□□□□□ -0.16
USP46-209ENST00000514536 SKOR1P84550 965 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 WASHC5Q12768 1159 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 GRIK2Q13002 908 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 RSPO4Q2I0M5 234 aaPredicted RBP14.04□□□□□ -0.16
USP46-209ENST00000514536 KIF19Q2TAC6 998 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 SEL1L2Q5TEA6 688 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 STPG1Q5TH74 334 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 PIH1D2Q8WWB5 315 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 TEKT5Q96M29 485 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 GLOD4Q9HC38 313 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 PHTF1Q9UMS5 762 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 CHKBQ9Y259 395 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 ANKRD6Q9Y2G4 727 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 COQ6Q9Y2Z9 468 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 SNX11Q9Y5W9 270 aa14.04□□□□□ -0.16
USP46-209ENST00000514536 KCNK3O14649 394 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 RAD51BO15315 384 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 TM7SF2O76062 418 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 RBP3P10745 1247 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 CTPS1P17812 591 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 MMP12P39900 470 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 LIG3P49916 1009 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 C21orf59P57076 290 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 CLDN2P57739 230 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 KLF1Q13351 362 aaPredicted RBP14.03□□□□□ -0.16
USP46-209ENST00000514536 DARS2Q6PI48 645 aaKnown RBP14.03□□□□□ -0.16
USP46-209ENST00000514536 PID1Q7Z2X4 250 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 ZSCAN30Q86W11 494 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 MFSD2AQ8NA29 543 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 TTC13Q8NBP0 860 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 NETO1Q8TDF5 533 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 SPOCK2Q92563 424 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 SKA1Q96BD8 255 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 IMP4Q96G21 291 aaKnown RBP14.03□□□□□ -0.16
USP46-209ENST00000514536 RBM15Q96T37 977 aaKnown RBP eCLIP14.03□□□□□ -0.16
USP46-209ENST00000514536 TLR10Q9BXR5 811 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 ZDHHC5Q9C0B5 715 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 SLC25A51Q9H1U9 297 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 TMEM9BQ9NQ34 198 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 DLL3Q9NYJ7 618 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 CACNA1AO00555 2505 aa14.03□□□□□ -0.16
USP46-209ENST00000514536 H0Y8X5 98 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 TLR4O00206 839 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 FZD6O60353 706 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 PRLP01236 227 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 CD68P34810 354 aaPredicted RBP14.02□□□□□ -0.16
USP46-209ENST00000514536 EPHB1P54762 984 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms