RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	MGAT1	P26572	445 aa		11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	PDK2	Q15119	407 aa		11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	STXBP2	Q15833	593 aa		11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	PTPN20	Q4JDL3	420 aa		11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	BTBD8	Q5XKL5	378 aa		11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	ASCC1	Q8N9N2	400 aa	Known RBP	11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	CHID1	Q9BWS9	393 aa		11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	NMRAL1	Q9HBL8	299 aa		11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	THG1L	Q9NWX6	298 aa	Known RBP	11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	BAG5	Q9UL15	447 aa		11.21	□□□□□ -0.62
PDCD6-210	ENST00000513582	COL5A3	P25940	1745 aa	Predicted RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	PTGES3L	E9PB15	166 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	MRAS	O14807	208 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	TRIM24	O15164	1050 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	TBX1	O43435	398 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	DAB1	O75553	588 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	SPN	P16150	400 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	LRPAP1	P30533	357 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	TPD52	P55327	224 aa	Predicted RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	ATP6V0D1	P61421	351 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	SPDYE2	Q495Y8	402 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	MAP4K3	Q8IVH8	894 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	ANKRD13A	Q8IZ07	590 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	TTC30B	Q8N4P2	665 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	HDAC10	Q969S8	669 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	PEBP4	Q96S96	227 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	UHRF1	Q96T88	793 aa	Predicted RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	APOL2	Q9BQE5	337 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	SLC7A5P2	Q9GIP4	190 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	TASP1	Q9H6P5	420 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	GTSE1	Q9NYZ3	720 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582		M0QX08	132 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	KCNK2	O95069	426 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	ITGB3	P05106	788 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	MAPT	P10636	758 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	LCP1	P13796	627 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	CASP3	P42574	277 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	RPS9	P46781	194 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	KRT6C	P48668	564 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	CCNA1	P78396	465 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	FASTK	Q14296	549 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	PCSK7	Q16549	785 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	PPP1R3A	Q16821	1122 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	DUOXA2	Q1HG44	320 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	DALRD3	Q5D0E6	543 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	CATSPERE	Q5SY80	951 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	INTS11	Q5TA45	600 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	GTF2IRD2B	Q6EKJ0	949 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	ZNF280D	Q6N043	979 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	GTF2IRD2	Q86UP8	949 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	FAM35A	Q86V20	835 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	DNAAF3	Q8N9W5	541 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	OR7A2P	Q8NGA2	310 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	S100Z	Q8WXG8	99 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	TFAP2B	Q92481	460 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	LRRC39	Q96DD0	335 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	LRCH3	Q96II8	777 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	TXNDC15	Q96J42	360 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	RPF1	Q9H9Y2	349 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	LTB4R2	Q9NPC1	389 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	MRPL40	Q9NQ50	206 aa	Known RBP	11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	ENPP5	Q9UJA9	477 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582	SPEF1	Q9Y4P9	236 aa		11.2	□□□□□ -0.62
PDCD6-210	ENST00000513582		C9JVG2	144 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	B4GALT5	O43286	388 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	SRP72	O76094	671 aa	Known RBP	11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	PSMA4	P25789	261 aa	Known RBP	11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	GNG2	P59768	71 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	STX1B	P61266	288 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	VBP1	P61758	197 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	TJAP1	Q5JTD0	557 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	DENND1B	Q6P3S1	775 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	LYPD8	Q6UX82	237 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	SPATC1	Q76KD6	591 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	BEND7	Q8N7W2	519 aa	Predicted RBP	11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	NIPA2	Q8N8Q9	360 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	ELMO1	Q92556	727 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	COPS5	Q92905	334 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	SDCCAG3	Q96C92	435 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	CLSTN3	Q9BQT9	956 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	ALOXE3	Q9BYJ1	711 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	PIM2	Q9P1W9	311 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	CRNN	Q9UBG3	495 aa	Predicted RBP	11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	INMT	O95050	263 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	ALB	P02768	609 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	C4BPA	P04003	597 aa	Known RBP	11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	PRKCB	P05771	671 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	ITIH1	P19827	911 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	SFN	P31947	248 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	SHMT2	P34897	504 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	P2RX3	P56373	397 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	STX5	Q13190	355 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	SAMD4B	Q5PRF9	694 aa	Known RBP	11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	PAGE2	Q7Z2X7	111 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	MFSD4A	Q8N468	514 aa		11.19	□□□□□ -0.62
PDCD6-210	ENST00000513582	SPATA6L	Q8N4H0	392 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms