RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 SLC39A13Q96H72 371 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 PPP1R16AQ96I34 528 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 EPSTI1Q96J88 318 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 IPO9Q96P70 1041 aaKnown RBP9.68□□□□□ -0.86
PTPN20-223ENST00000509900 MDFIQ99750 246 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 LRRC4Q9HBW1 653 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 APOBEC3GQ9HC16 384 aaKnown RBP9.68□□□□□ -0.86
PTPN20-223ENST00000509900 APMAPQ9HDC9 416 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 TMEM9Q9P0T7 183 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 IL36AQ9UHA7 158 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 CROTQ9UKG9 612 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 ITM2BQ9Y287 266 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 DOCK4Q8N1I0 1966 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 CACNA1CQ13936 2221 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 PRRC2AP48634 2157 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 MN1Q10571 1320 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 A6NCN8 305 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 ZSCAN5CA6NGD5 496 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 LRRTM2O43300 516 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 OIP5O43482 229 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 TSPAN6O43657 245 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 PRICKLE3O43900 615 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 IL2RAP01589 272 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 RPN1P04843 607 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 RRM1P23921 792 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 NFKBIAP25963 317 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 L1CAMP32004 1257 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 LONP1P36776 959 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 DLSTP36957 453 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 MAP2K3P46734 347 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 ITGA1P56199 1179 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 MAZP56270 477 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 PER3P56645 1201 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 DAOAP59103 153 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 SRP54P61011 504 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 DLG4P78352 724 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 MC2RQ01718 297 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 CENPCQ03188 943 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 NKAIN2Q5VXU1 208 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 ARHGAP17Q68EM7 881 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 SPECC1LQ69YQ0 1117 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 DPY19L3Q6ZPD9 716 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 PARS2Q7L3T8 475 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 CDH24Q86UP0 819 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 CHSY1Q86X52 802 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 ZNF295-AS1Q8N0V1 137 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 RBMXL3Q8N7X1 1067 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 TP53I13Q8NBR0 393 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 SLC4A11Q8NBS3 891 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 PNPLA2Q96AD5 504 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 CCDC114Q96M63 670 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 SPOCK3Q9BQ16 436 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 LLPHQ9BRT6 129 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 CYP3A43Q9HB55 503 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 FN1P02751 2386 aaKnown RBP9.67□□□□□ -0.86
PTPN20-223ENST00000509900 COL6A5A8TX70 2615 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 STAB1Q9NY15 2570 aa9.67□□□□□ -0.86
PTPN20-223ENST00000509900 TCAF2A6NFQ2 919 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 TOR1BO14657 336 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 XPO1O14980 1071 aaKnown RBP9.66□□□□□ -0.86
PTPN20-223ENST00000509900 INPP4BO15327 924 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 SNAP91O60641 907 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
PTPN20-223ENST00000509900 LRCH4O75427 683 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 HLA-DRAP01903 254 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 IRAK1P51617 712 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 CHAF1BQ13112 559 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
PTPN20-223ENST00000509900 MAP7Q14244 749 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 ENPP7Q6UWV6 458 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 CEACAM20Q6UY09 585 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 STXBP4Q6ZWJ1 553 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 EPM2AIP1Q7L775 607 aaPredicted RBP9.66□□□□□ -0.86
PTPN20-223ENST00000509900 TAF8Q7Z7C8 310 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 SCML4Q8N228 414 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 ESX1Q8N693 406 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 ATP11CQ8NB49 1132 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 RNF31Q96EP0 1072 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 PDXPQ96GD0 296 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 PSMB7Q99436 277 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 PRMT1Q99873 361 aaKnown RBP9.66□□□□□ -0.86
PTPN20-223ENST00000509900 TWSG1Q9GZX9 223 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 TNKS2Q9H2K2 1166 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 CNGB3Q9NQW8 809 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 VPS28Q9UK41 221 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 TLR6Q9Y2C9 796 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 PIKFYVEQ9Y2I7 2098 aa9.66□□□□□ -0.86
PTPN20-223ENST00000509900 NSD1Q96L73 2696 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-223ENST00000509900 PIPSLA2A3N6 862 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 DPM1O60762 260 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 KATNA1O75449 491 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 ZNF821O75541 412 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-223ENST00000509900 CREG1O75629 220 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 FYNP06241 537 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 CD1EP15812 388 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 BMP6P22004 513 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 PIK3CAP42336 1068 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 PEX5P50542 639 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 RAD23BP54727 409 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms