RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 FPGTO14772 594 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 SCAMP1O15126 338 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 MFSD11O43934 449 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 DESP17661 470 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 ACP1P24666 158 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 GJC1P36383 396 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 RABIFP47224 123 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 CSNK1DP48730 415 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 MAXP61244 160 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 INSM1Q01101 510 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 RAD51Q06609 339 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 ZNF211Q13398 564 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 C1orf61Q13536 156 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 LBRQ14739 615 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 TCEA2Q15560 299 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 PARGQ86W56 976 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 ZNF564Q8TBZ8 553 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 CXorf40AQ8TE69 158 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 DNAJC7Q99615 494 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 CINPQ9BW66 212 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 CLPBQ9H078 707 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 IP6K2Q9UHH9 426 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 APC2O95996 2303 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 CELSR3Q9NYQ7 3312 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 LIG3P49916 1009 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 SCNN1BP51168 640 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 CDH6P55285 790 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 CYP4F3Q08477 520 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 DPYSL3Q14195 570 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 DEFB133Q30KQ1 61 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 BOLA3Q53S33 107 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 VSTM4Q8IW00 320 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 PCDH19Q8TAB3 1148 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 TEKT4Q8WW24 435 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 IFT43Q96FT9 208 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 PSKH2Q96QS6 385 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 LRRC61Q9BV99 259 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 ATP8A1Q9Y2Q0 1164 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 PCDHGC4Q9Y5F7 938 aa16.85■□□□□ 0.29
PDLIM7-215ENST00000506161 ARHGEF17Q96PE2 2063 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 JUNDP17535 347 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 ARL4AP40617 200 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 ADKP55263 362 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 TRAF2Q12933 501 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 TARDBPQ13148 414 aaKnown RBP eCLIP16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 TMCO4Q5TGY1 634 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 NCBP2-AS2Q69YL0 99 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 TMCO3Q6UWJ1 677 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 LIPIQ6XZB0 460 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 PHACTR4Q8IZ21 702 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 GALNT15Q8N3T1 639 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 ZNF641Q96N77 438 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 TUBGCP5Q96RT8 1024 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 SPTLC3Q9NUV7 552 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 NLGN3Q9NZ94 848 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 OR1A2Q9Y585 309 aa16.84■□□□□ 0.29
PDLIM7-215ENST00000506161 PCCBP05166 539 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 CKMT1AP12532 417 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 HNRNPKP61978 463 aaKnown RBP eCLIP16.83■□□□□ 0.281e-16■■■■■ 57.8
PDLIM7-215ENST00000506161 NSUN2Q08J23 767 aaKnown RBP eCLIP16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 SLC10A2Q12908 348 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 SLC18A3Q16572 532 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 SPECC1LQ69YQ0 1117 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 BRAT1Q6PJG6 821 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 ZSCAN30Q86W11 494 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 TMPRSS12Q86WS5 348 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 DCP2Q8IU60 420 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 SFTPA2Q8IWL1 248 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 PQLC3Q8N755 202 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 FAM174AQ8TBP5 190 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 HCAR2Q8TDS4 363 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 LMX1AQ8TE12 382 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 TSACCQ96A04 125 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 IQCDQ96DY2 449 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 TSPY26PQ9H489 355 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 NOD2Q9HC29 1040 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 DKK4Q9UBT3 224 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 PCDHB1Q9Y5F3 818 aa16.83■□□□□ 0.28
PDLIM7-215ENST00000506161 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.83■□□□□ 0.284e-7■□□□□ 9.2
PDLIM7-215ENST00000506161 ZFC3H1O60293 1989 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 TMEM110-MUSTN1A8MSY1 372 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 MYO1FO00160 1098 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 AQP9O43315 295 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 HTRA2O43464 458 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 MFAP3LO75121 409 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 PROSCO94903 275 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 C1SP09871 688 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 LHCGRP22888 699 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 XPAP23025 273 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 SERPINA4P29622 427 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 SSR1P43307 286 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 ZNF135P52742 658 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 DAB2P98082 770 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 BCL2L1Q07817 233 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 ELP6Q0PNE2 266 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 INPP5AQ14642 412 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 RFTN1Q14699 578 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 AGERQ15109 404 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 ALG11Q2TAA5 492 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 PERM1Q5SV97 790 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms