RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ETS1P14921 441 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZFXP17010 805 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 HOXB9P17482 250 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ITIH1P19827 911 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 AGAP20933 346 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ACHEP22303 614 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 KELP23276 732 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 GCSHP23434 173 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMOD1P28289 359 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 CDAP32320 146 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC8A1P32418 973 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 GJC1P36383 396 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 LIPAP38571 399 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 MAGEA4P43358 317 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 GATA4P43694 442 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 AGTR2P50052 363 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SUOXP51687 545 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 JAK3P52333 1124 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARFIP1P53367 373 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SUMO2P61956 95 aaKnown RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 FAM189BP81408 668 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 PPIGQ13427 754 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 OLIG2Q13516 323 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 RIN1Q13671 783 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 RNPS1Q15287 305 aaKnown RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 RPS6KA1Q15418 735 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 DLG2Q15700 870 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 TBR1Q16650 682 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARL13AQ5H913 290 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 KCNT1Q5JUK3 1230 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 RARS2Q5T160 578 aaKnown RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMEM211Q6ICI0 200 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 HEPHL1Q6MZM0 1159 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 MFSD7Q6UXD7 560 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC39A5Q6ZMH5 540 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 NFXL1Q6ZNB6 911 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 PRSS45Q7RTY3 260 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADGRE4PQ86SQ3 457 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SCYL3Q8IZE3 742 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF808Q8N4W9 903 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZCCHC9Q8N567 271 aaKnown RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 AMER2Q8N7J2 671 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 HJURPQ8NCD3 748 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADPRHL1Q8NDY3 354 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 BEND2Q8NDZ0 799 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SETD9Q8NE22 299 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 GMCL1P1Q8NEA9 526 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 KIAA1524Q8TCG1 905 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 PTPMT1Q8WUK0 201 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC13A3Q8WWT9 602 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 THRSPQ92748 146 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 NXNL1Q96CM4 212 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 RNF31Q96EP0 1072 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMEM176AQ96HP8 235 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 UROC1Q96N76 676 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 NUDCD1Q96RS6 583 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 NPAS1Q99742 590 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 TXN2Q99757 166 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 CARD6Q9BX69 1037 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 XYLT2Q9H1B5 865 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 CDCP1Q9H5V8 836 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 MMRN2Q9H8L6 949 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SFXN1Q9H9B4 322 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 AKIRIN1Q9H9L7 192 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC28A3Q9HAS3 691 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 EPB41L5Q9HCM4 733 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC35D1Q9NTN3 355 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 C19orf73Q9NVV2 129 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 PAG1Q9NWQ8 432 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 WSB2Q9NYS7 404 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMOD2Q9NZR1 351 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 VSX1Q9NZR4 365 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 VPS18Q9P253 973 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 ANKFY1Q9P2R3 1169 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 HDAC6Q9UBN7 1215 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 DKK3Q9UBP4 350 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 UPB1Q9UBR1 384 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 LEF1Q9UJU2 399 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 GMEB2Q9UKD1 530 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 NFS1Q9Y697 457 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 MAU2Q9Y6X3 613 aa3.71□□□□□ -1.82
HMGB1P22-201ENST00000505315 TYW5A2RUC4 315 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 OR6C68A6NDL8 312 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CCDC169A6NNP5 214 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 E7ENX8 843 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 SGK1O00141 431 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 AP4M1O00189 453 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 RASGRF2O14827 1237 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 SEC14L5O43304 696 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 PLRG1O43660 514 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 GMFGO60234 142 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 HSF2BPO75031 334 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 MFAP3LO75121 409 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARHGEF15O94989 841 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 C1RP00736 705 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADAP00813 363 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ERBB2P04626 1255 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 FESP07332 822 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZFYP08048 801 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms