RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 DCLK1O15075 740 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 SPOPO43791 374 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 SERPINA3P01011 423 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 TFRCP02786 760 aaKnown RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 HMBSP08397 361 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 STAG3L3P0CL85 134 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CHN1P15882 459 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 APEX1P27695 318 aaKnown RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CTNNB1P35222 781 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CD96P40200 585 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 NRG3P56975 720 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 OLR1P78380 273 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 DUSP8Q13202 625 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 PGM5Q15124 567 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 RCN1Q15293 331 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 KCNA10Q16322 511 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 XKR3Q5GH77 459 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 HERC4Q5GLZ8 1057 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 PLXDC1Q8IUK5 500 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ZNF565Q8N9K5 539 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 IQUBQ8NA54 791 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 SLC17A8Q8NDX2 589 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CADM4Q8NFZ8 388 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CALML6Q8TD86 181 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CKAP2Q8WWK9 683 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 C17orf80Q9BSJ5 609 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 RAB9BQ9NP90 201 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 PPP1R14DQ9NXH3 145 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ALKBH4Q9NXW9 302 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CCPG1Q9ULG6 757 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CDY1Q9Y6F8 540 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 DHX29Q7Z478 1369 aaKnown RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 TEX13CA0A0J9YWL9 993 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 FAM95CA0A1B0GW59 222 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 A0A1W2PQJ5 194 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 FAM90A8PA6NJQ4 464 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 EIF3CLB5ME19 914 aaKnown RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ADM5C9JUS6 153 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ESR1P03372 595 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 FAM90A13PP0C7W8 464 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 FAM90A24PP0C7X0 464 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ADRA2CP18825 462 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ADRA1DP25100 572 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CCT6AP40227 531 aaKnown RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CCR3P51677 355 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ZNF134P52741 427 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 WNT3P56703 355 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CSNK2BP67870 215 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 DMPKQ09013 629 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ZXDCQ2QGD7 858 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 AP5B1Q2VPB7 878 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 TMEM196Q5HYL7 178 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 KANK2Q63ZY3 851 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 HIST2H2BCQ6DN03 193 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 HIST2H2BDQ6DRA6 164 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 PMF1Q6P1K2 205 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 GALNT18Q6P9A2 607 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 RHPN2Q8IUC4 686 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 UNC5BQ8IZJ1 945 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 ENDOVQ8N8Q3 282 aaKnown RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 CLEC1AQ8NC01 280 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 PPP2R3CQ969Q6 453 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 QRFPRQ96P65 431 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 EIF3CQ99613 913 aaKnown RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 BCO1Q9HAY6 547 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 MARCH4Q9P2E8 410 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-204ENST00000504430 PEMTQ9UBM1 199 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 PCDHB2Q9Y5E7 798 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 PMF1-BGLAPU3KQ54 211 aa5.3□□□□□ -1.56
NIPBL-204ENST00000504430 BCAT2O15382 392 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 KRT86O43790 486 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 CTAG2O75638 210 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 CYP3A4P08684 503 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 AKT2P31751 481 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 HTR7P34969 479 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 THBS4P35443 961 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ABCG1P45844 678 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 TOB1P50616 345 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 CDR1P51861 262 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 SMSP52788 366 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ST8SIA6P61647 398 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ADAM17P78536 824 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 CUL1Q13616 776 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 BTG3Q14201 252 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 DLG2Q15700 870 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 PRAMEF8Q5VWM4 474 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 HEPHL1Q6MZM0 1159 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ZNF529Q6P280 563 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 CLEC9AQ6UXN8 241 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 OTOP2Q7RTS6 562 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 SLCO6A1Q86UG4 719 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ARHGAP12Q8IWW6 846 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 CDAN1Q8IWY9 1227 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 ZNF480Q8WV37 535 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 GLMPQ8WWB7 406 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 KLHL29Q96CT2 875 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 C5orf30Q96GV9 206 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 DHTKD1Q96HY7 919 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-204ENST00000504430 SLC46A1Q96NT5 459 aa5.29□□□□□ -1.56
NIPBL-204ENST00000504430 FCRL4Q96PJ5 515 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms