RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 COPG2Q9UBF2 871 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SLC2A6Q9UGQ3 507 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 DNMT3LQ9UJW3 386 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 F5H5T6 163 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 RTCAO00442 366 aaKnown RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 HAUS5O94927 633 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 CBX6O95503 412 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SERPINE1P05121 402 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 MMP2P08253 660 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SFTPCP11686 197 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 ARNTP27540 789 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 GABRB3P28472 473 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 S100A5P33763 92 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 ATP5C1P36542 298 aaKnown RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 CSRP3P50461 194 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 IRF9Q00978 393 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 DSC2Q02487 901 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SERINC3Q13530 473 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 LAPTM5Q13571 262 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SEPT6Q14141 434 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 UGP2Q16851 508 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 TRIM60Q495X7 471 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 KIAA0930Q6ICG6 404 aaPredicted RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 LGI2Q8N0V4 545 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 PDZD8Q8NEN9 1154 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 INPP5DQ92835 1189 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 CLIP3Q96DZ5 547 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 MMADHCQ9H3L0 296 aaPredicted RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 FBXO6Q9NRD1 293 aaPredicted RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 AFF4Q9UHB7 1163 aaKnown RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 SLC39A10Q9ULF5 831 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 MYLKQ15746 1914 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 MICAL3Q7RTP6 2002 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 ACSL4O60488 711 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 SIN3BO75182 1162 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 ZNF254O75437 659 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 STAMBPO95630 424 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 AHSGP02765 367 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 CPA3P15088 417 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 PAMP19021 973 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 OR1E1P30953 314 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 ACVRL1P37023 503 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 SLC1A6P48664 564 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 CDKN1CP49918 316 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 IKBKEQ14164 716 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 SUZ12Q15022 739 aaKnown RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 SNCBQ16143 134 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 C5orf22Q49AR2 442 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 HSF5Q4G112 596 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 ANKRD39Q53RE8 183 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 SNX30Q5VWJ9 437 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 KIAA1841Q6NSI8 718 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 DENND6AQ8IWF6 608 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 PGBD5Q8N414 524 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 OR8H1Q8NGG4 311 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 OVCA2Q8WZ82 227 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 SLC7A6OSQ96CW6 309 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 ZNF512Q96ME7 567 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 TMEM237Q96Q45 408 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 MARCOQ9UEW3 520 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 PCDHGB3Q9Y5G1 929 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 ZNF840PA6NDX5 716 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 ITM2AO43736 263 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 LYPLA1O75608 230 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 GJB5O95377 273 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 SEC24AO95486 1093 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 SCGB1D2O95969 90 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 KITP10721 976 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 GRK2P25098 689 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 SLC6A4P31645 630 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 SERPINH1P50454 418 aaKnown RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 MRPS35P82673 323 aaKnown RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 MPP1Q00013 466 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 THOC5Q13769 683 aaKnown RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 IHHQ14623 411 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 CNKSR3Q6P9H4 555 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 ARRDC2Q8TBH0 407 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 TADA1Q96BN2 335 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 PRR11Q96HE9 360 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 TOX2Q96NM4 488 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 RANBP9Q96S59 729 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 WWP1Q9H0M0 922 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 AASDHPPTQ9NRN7 309 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 PNMA8BQ9ULN7 279 aaPredicted RBP11.66□□□□□ -0.54
USP46-204ENST00000503060 ANKRD6Q9Y2G4 727 aa11.66□□□□□ -0.54
USP46-204ENST00000503060 HEATR9A2RTY3 570 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 FCHO1O14526 889 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 PRAMEF11O60813 436 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 RALBP11234 206 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 HMGA1P17096 107 aaKnown RBP11.65□□□□□ -0.54
USP46-204ENST00000503060 ETFBP38117 255 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 RASSF2P50749 326 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 CLCN2P51788 898 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 AQP5P55064 265 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 CTBP1Q13363 440 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 RIPK1Q13546 671 aa11.65□□□□□ -0.54
USP46-204ENST00000503060 USP10Q14694 798 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms