RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CNTN1Q12860 1018 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 SEMA5AQ13591 1074 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 TEX35Q5T0J7 233 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.32■□□□□ 0.36
LIME1-208ENST00000493265 PARS2Q7L3T8 475 aaKnown RBP17.32■□□□□ 0.36
LIME1-208ENST00000493265 ZSWIM9Q86XI8 627 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 AADATQ8N5Z0 425 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 CCHCR1Q8TD31 782 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 TADA1Q96BN2 335 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 MRGPRX2Q96LB1 330 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 PPP1R2P1Q96PQ5 205 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 TBL1YQ9BQ87 522 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 EPC1Q9H2F5 836 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 PABPC3Q9H361 631 aaKnown RBP17.32■□□□□ 0.36
LIME1-208ENST00000493265 CD93Q9NPY3 652 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 PRMT8Q9NR22 394 aaPredicted RBP17.32■□□□□ 0.36
LIME1-208ENST00000493265 VPS45Q9NRW7 570 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 PIH1D1Q9NWS0 290 aaKnown RBP17.32■□□□□ 0.36
LIME1-208ENST00000493265 SNX24Q9Y343 169 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 TRAFD1O14545 582 aaPredicted RBP17.31■□□□□ 0.36
LIME1-208ENST00000493265 RIOK3O14730 519 aaKnown RBP17.31■□□□□ 0.36
LIME1-208ENST00000493265 PSMD3O43242 534 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 LILRB5O75023 590 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 PGLSO95336 258 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 SLU7O95391 586 aaKnown RBP17.31■□□□□ 0.36
LIME1-208ENST00000493265 RHOXF2BP0C7M4 288 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 CTPS1P17812 591 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 ITIH2P19823 946 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 C5AR1P21730 350 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 ITGB7P26010 798 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 CHRNA4P43681 627 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 PTPRRQ15256 657 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 TTC31Q49AM3 519 aaPredicted RBP17.31■□□□□ 0.36
LIME1-208ENST00000493265 IZUMO3Q5VZ72 239 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 CCDC70Q6NSX1 233 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 FBXL19Q6PCT2 694 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 PPP1R21Q6ZMI0 780 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 TTC7BQ86TV6 843 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 SMIM14Q96QK8 99 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 RHOXF2Q9BQY4 288 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 ERP44Q9BS26 406 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 LRRC40Q9H9A6 602 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 FBXL12Q9NXK8 326 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 SERGEFQ9UGK8 458 aa17.31■□□□□ 0.36
LIME1-208ENST00000493265 UTP11Q9Y3A2 253 aaKnown RBP17.31■□□□□ 0.36
LIME1-208ENST00000493265 SPTBN2O15020 2390 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.3■□□□□ 0.36
LIME1-208ENST00000493265 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 A8MX80 341 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 GOLGA8MH3BSY2 632 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 K7ESF4 209 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 HTRA2O43464 458 aaPredicted RBP17.3■□□□□ 0.36
LIME1-208ENST00000493265 HEXIM1O94992 359 aaKnown RBP17.3■□□□□ 0.36
LIME1-208ENST00000493265 AP2A1O95782 977 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 PRLP01236 227 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 TIMP2P16035 220 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 RPL21P46778 160 aaKnown RBP17.3■□□□□ 0.36
LIME1-208ENST00000493265 DMWDQ09019 674 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 SIRPB2Q5JXA9 342 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 ANKRD22Q5VYY1 191 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 ERN2Q76MJ5 926 aaKnown RBP17.3■□□□□ 0.36
LIME1-208ENST00000493265 CPT1BQ92523 772 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 NELL1Q92832 810 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 SNF8Q96H20 258 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 FEM1CQ96JP0 617 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 ADGRE3Q9BY15 652 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 RAB17Q9H0T7 212 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 EBF1Q9UH73 591 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 TPX2Q9ULW0 747 aaKnown RBP17.3■□□□□ 0.36
LIME1-208ENST00000493265 CYP8B1Q9UNU6 501 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 INVSQ9Y283 1065 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 NCKAP1Q9Y2A7 1128 aa17.3■□□□□ 0.36
LIME1-208ENST00000493265 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 DNALI1O14645 258 aaPredicted RBP17.29■□□□□ 0.36
LIME1-208ENST00000493265 NDST3O95803 873 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 ALPIP09923 528 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 PIRTP0C851 137 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 DRD3P35462 400 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 P2RY2P41231 377 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 GRIA1P42261 906 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 TPMTP51580 245 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 NEK3P51956 506 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 POLR2LP62875 67 aaKnown RBP17.29■□□□□ 0.36
LIME1-208ENST00000493265 FAM193AP78312 1265 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 GUCY2DQ02846 1103 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 MTM1Q13496 603 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 KCNJ11Q14654 390 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 SLC14A2Q15849 920 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 LPAL2Q16609 132 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 KCTD11Q693B1 232 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 BRAT1Q6PJG6 821 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 PPIL6Q8IXY8 311 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 CAMKK1Q8N5S9 505 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 GPR161Q8N6U8 529 aaKnown RBP17.29■□□□□ 0.36
LIME1-208ENST00000493265 DNAAF3Q8N9W5 541 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 RLN3Q8WXF3 142 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 ECHDC3Q96DC8 303 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 NEUROG2Q9H2A3 272 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 DKK3Q9UBP4 350 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms