RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 NPLQ9BXD5 320 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 HEMGNQ9BXL5 484 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TRIM7Q9C029 511 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 GSTO2Q9H4Y5 243 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 ZDHHC6Q9H6R6 413 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TLR8Q9NR97 1041 aaKnown RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 ARL8BQ9NVJ2 186 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 MRPL15Q9P015 296 aaKnown RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 ISY1Q9ULR0 285 aaKnown RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 NHSL1Q5SYE7 1610 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 QSOX1O00391 747 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 DYNC1I1O14576 645 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 MSTNO14793 375 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 PGRMC2O15173 223 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SLC16A8O95907 504 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TFP02787 698 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 DESP17661 470 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 VIPR1P32241 457 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 PGDP52209 483 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TAS2R50P59544 299 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SGCBQ16585 318 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 ZSWIM7Q19AV6 140 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 ZNF771Q7L3S4 317 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 PRSS45Q7RTY3 260 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 MDGA2Q7Z553 956 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 GPR149Q86SP6 731 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TBC1D21Q8IYX1 336 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 ELMOD2Q8IZ81 293 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 Q8N3U1 123 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TSPAN14Q8NG11 270 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 RAB24Q969Q5 203 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SLCO4A1Q96BD0 722 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TBC1D31Q96DN5 1066 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SNX18Q96RF0 628 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 PANK2Q9BZ23 570 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 GBA2Q9HCG7 927 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 RAD54BQ9Y620 910 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 IKBKGQ9Y6K9 419 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 CAPN14A8MX76 684 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 MAGEB17A8MXT2 336 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 GALTP07902 379 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 CYP2C18P33260 490 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 ATXN3P54252 364 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 RIPK4P57078 832 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 RPA4Q13156 261 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SEMA3BQ13214 749 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 KIF19Q2TAC6 998 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 DPCR1Q3MIW9 517 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 LEXMQ3ZCV2 418 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 AMER2Q8N7J2 671 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 FRMD1Q8N878 549 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SLC38A9Q8NBW4 561 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SMCR8Q8TEV9 937 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 UHRF1Q96T88 793 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 PARK7Q99497 189 aaKnown RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TBCDQ9BTW9 1192 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 MEGF9Q9H1U4 602 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TMEM245Q9H330 911 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 NSUN3Q9H649 340 aaKnown RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SEBOXQ9HB31 216 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 SNTG1Q9NSN8 517 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 LAMP5Q9UJQ1 280 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 TLK1Q9UKI8 766 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 CNOT11Q9UKZ1 510 aaKnown RBP3.04□□□□□ -1.92
UBXN4-208ENST00000490163 CDC42BPGQ6DT37 1551 aa3.04□□□□□ -1.92
UBXN4-208ENST00000490163 KIF1AQ12756 1690 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 PIK3R4Q99570 1358 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 FAM25EA8MYX2 175 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 FOXD2O60548 495 aaPredicted RBP3.03□□□□□ -1.92
UBXN4-208ENST00000490163 SEMA7AO75326 666 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 ELANEP08246 267 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 C1QTNF9P0C862 333 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 SLC6A2P23975 617 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 GGT5P36269 586 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 RAC3P60763 192 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 LAMB3Q13751 1172 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 SPOUT1Q5T280 376 aaKnown RBP3.03□□□□□ -1.92
UBXN4-208ENST00000490163 UBAP2Q5T6F2 1119 aaKnown RBP3.03□□□□□ -1.92
UBXN4-208ENST00000490163 PRR27Q6MZM9 219 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 TTI2Q6NXR4 508 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 FBXO46Q6PJ61 603 aaPredicted RBP3.03□□□□□ -1.92
UBXN4-208ENST00000490163 DBX2Q6ZNG2 339 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 PM20D2Q8IYS1 436 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 ATP6V1E2Q96A05 226 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 DCAF5Q96JK2 942 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 OSBPL1AQ9BXW6 950 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 POLR1EQ9GZS1 481 aaKnown RBP3.03□□□□□ -1.92
UBXN4-208ENST00000490163 KCNF1Q9H3M0 494 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 IL23AQ9NPF7 189 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 BTG4Q9NY30 223 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 SLAMF8Q9P0V8 285 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 NKX1-2Q9UD57 310 aaPredicted RBP3.03□□□□□ -1.92
UBXN4-208ENST00000490163 NUDCQ9Y266 331 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 PCDHB7Q9Y5E2 793 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 TRPV2Q9Y5S1 764 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 COL22A1Q8NFW1 1626 aaPredicted RBP3.03□□□□□ -1.92
UBXN4-208ENST00000490163 MROH5Q6ZUA9 1318 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 PRAMEF33A0A0G2JMD5 474 aa3.03□□□□□ -1.92
UBXN4-208ENST00000490163 TRBV2A0A0J9YWF9 115 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms