RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CLDN11O75508 207 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 TRUB2O95900 331 aaKnown RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 TRIM49P0CI25 452 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 TRIM49CP0CI26 452 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 TIMP2P16035 220 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 ITIH2P19823 946 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 BMP6P22004 513 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 PTGER4P35408 488 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 GGCXP38435 758 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 GPR3P46089 330 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 PPM1FP49593 454 aaPredicted RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 VAMP7P51809 220 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 ITGA1P56199 1179 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 AUHQ13825 339 aaKnown RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 RYBPQ8N488 228 aaPredicted RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 RBMXL3Q8N7X1 1067 aaKnown RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 OR6K2Q8NGY2 324 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 ZDHHC1Q8WTX9 485 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 EEF2KMTQ96G04 330 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 REPIN1Q9BWE0 567 aaKnown RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 LRRC27Q9C0I9 530 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 TNMDQ9H2S6 317 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 FGF22Q9HCT0 170 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 HECAQ9UBI9 543 aaPredicted RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 CLIC4Q9Y696 253 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 POLEQ07864 2286 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 TMEM202A6NGA9 273 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 O00370 1275 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 POLR1CO15160 346 aaPredicted RBP15.15■□□□□ 0.02
UFD1-209ENST00000489406 FBXO21O94952 628 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 ECEL1O95672 775 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 ZNF28P17035 718 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 PITX1P78337 314 aaPredicted RBP15.15■□□□□ 0.02
UFD1-209ENST00000489406 SQSTM1Q13501 440 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 CHRNA6Q15825 494 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 ZNF805Q5CZA5 627 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 ANKRD40Q6AI12 368 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 C6orf15Q6UXA7 325 aaPredicted RBP15.15■□□□□ 0.02
UFD1-209ENST00000489406 LYSMD3Q7Z3D4 306 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 TTC7BQ86TV6 843 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 SLC47A2Q86VL8 602 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 PCDH20Q8N6Y1 951 aaKnown RBP15.15■□□□□ 0.02
UFD1-209ENST00000489406 PATE1Q8WXA2 126 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 SEMA4DQ92854 862 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 DPYSL5Q9BPU6 564 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 ULBP3Q9BZM4 244 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 ACSS2Q9NR19 701 aa15.15■□□□□ 0.02
UFD1-209ENST00000489406 PKDREJQ9NTG1 2253 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 ARGFXA6NJG6 315 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 PPM1DO15297 605 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 ADCY5O95622 1261 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 FGF1P05230 155 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 DRD2P14416 443 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 SLC9A9Q8IVB4 645 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 IQCKQ8N0W5 287 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 DCAF4L2Q8NA75 395 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 GALNT6Q8NCL4 622 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 OR56A4Q8NGH8 313 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 TM6SF2Q9BZW4 377 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 CEP44Q9C0F1 390 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 KBTBD4Q9NVX7 518 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 PDP2Q9P2J9 529 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 COPG2Q9UBF2 871 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 MOSPD1Q9UJG1 213 aa15.14■□□□□ 0.01
UFD1-209ENST00000489406 FCF1Q9Y324 198 aaKnown RBP15.14■□□□□ 0.01
UFD1-209ENST00000489406 SYNJ2BP-COX16A0A087WUM0 186 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 RECKO95980 971 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 IGLV3-25P01717 112 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 PCCBP05166 539 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 UGT2B4P06133 528 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 VDRP11473 427 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 CASP14P31944 242 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 CDH4P55283 916 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 HDAC4P56524 1084 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 LCLAT1Q6UWP7 414 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 ARHGAP22Q7Z5H3 698 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 RHOT1Q8IXI2 618 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 KLHL32Q96NJ5 620 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 SPON2Q9BUD6 331 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 ING2Q9H160 280 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 COX16Q9P0S2 106 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 PCDHGB7Q9Y5F8 929 aa15.13■□□□□ 0.01
UFD1-209ENST00000489406 KRIT1O00522 736 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 NR3C1P04150 777 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 SERPINH1P50454 418 aaKnown RBP15.12■□□□□ 0.01
UFD1-209ENST00000489406 KRTAP10-9P60411 292 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 DNASE1L3Q13609 305 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 PLEKHN1Q494U1 663 aaPredicted RBP15.12■□□□□ 0.01
UFD1-209ENST00000489406 ALFQ53S48 1182 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 CDH24Q86UP0 819 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 OR7D4Q8NG98 312 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 TFAP2BQ92481 460 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 FAXDC2Q96IV6 333 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 SUDS3Q9H7L9 328 aaPredicted RBP15.12■□□□□ 0.01
UFD1-209ENST00000489406 OSGIN2Q9Y236 505 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 FRMD4BQ9Y2L6 1034 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 ACTL7AQ9Y615 435 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 HS3ST4Q9Y661 456 aa15.12■□□□□ 0.01
UFD1-209ENST00000489406 M0QYV0 167 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms