RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 LRFN5Q96NI6 719 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 H2AFJQ9BTM1 129 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 BPIFA1Q9NP55 256 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 UBN1Q9NPG3 1134 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 OCIAD1Q9NX40 245 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 PGAP2Q9UHJ9 254 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 ZNF580Q9UK33 172 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 SARDHQ9UL12 918 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 CAMK2AQ9UQM7 478 aa4.17□□□□□ -1.74
TTC3-220ENST00000487711 CLEC18AA5D8T8 446 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 TTC36A6NLP5 189 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 C4orf47A7E2U8 309 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 KLK8O60259 260 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 TFP02787 698 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 ABCD1P33897 745 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 ARL1P40616 181 aaPredicted RBP4.16□□□□□ -1.74
TTC3-220ENST00000487711 CTCFP49711 727 aaPredicted RBP4.16□□□□□ -1.74
TTC3-220ENST00000487711 PDLIM4P50479 330 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 GRIK3Q13003 919 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 TRAF3Q13114 568 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 KEAP1Q14145 624 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 RNPS1Q15287 305 aaKnown RBP4.16□□□□□ -1.74
TTC3-220ENST00000487711 PRICKLE4Q2TBC4 344 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 TXNDC8Q6A555 127 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 ZNF324BQ6AW86 544 aaPredicted RBP4.16□□□□□ -1.74
TTC3-220ENST00000487711 ACAD10Q6JQN1 1059 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 CCDC129Q6ZRS4 1044 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 DHX40Q8IX18 779 aaKnown RBP4.16□□□□□ -1.74
TTC3-220ENST00000487711 TSPYL6Q8N831 410 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 CLEC18CQ8NCF0 446 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 ZNF570Q96NI8 536 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 FIZ1Q96SL8 496 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 SEC62Q99442 399 aaKnown RBP4.16□□□□□ -1.74
TTC3-220ENST00000487711 MMTAG2Q9BU76 263 aaKnown RBP4.16□□□□□ -1.74
TTC3-220ENST00000487711 CD93Q9NPY3 652 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 DOCK7Q96N67 2140 aa4.16□□□□□ -1.74
TTC3-220ENST00000487711 IGLV5-52A0A0A0MRZ9 124 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 NPIPB11E5RHQ5 1161 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 HSPA12AO43301 675 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 ZNF12P17014 697 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 HOXB6P17509 224 aaKnown RBP4.15□□□□□ -1.75
TTC3-220ENST00000487711 CD58P19256 250 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 GPTP24298 496 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 CHATP28329 748 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 GNAQP50148 359 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 SEC61A1P61619 476 aaKnown RBP4.15□□□□□ -1.75
TTC3-220ENST00000487711 BNC1Q01954 994 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 PTP4A2Q12974 167 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 NEDD9Q14511 834 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 NFATC4Q14934 902 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 TCTN1Q2MV58 587 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 H1FNTQ75WM6 255 aaPredicted RBP4.15□□□□□ -1.75
TTC3-220ENST00000487711 SLC46A3Q7Z3Q1 461 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 ZC3HC1Q86WB0 502 aaKnown RBP4.15□□□□□ -1.75
TTC3-220ENST00000487711 SCCPDHQ8NBX0 429 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 IL17REQ8NFR9 667 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 WASF1Q92558 559 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 SAAL1Q96ER3 474 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 POLR3GLQ9BT43 218 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 AGXT2Q9BYV1 514 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 SLCO5A1Q9H2Y9 848 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 C6orf106Q9H6K1 298 aaPredicted RBP4.15□□□□□ -1.75
TTC3-220ENST00000487711 JMJD4Q9H9V9 463 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 MAGEE1Q9HCI5 957 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 PREBQ9HCU5 417 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 A4GNTQ9UNA3 340 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 CDC14AQ9UNH5 594 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 NFE2L3Q9Y4A8 694 aa4.15□□□□□ -1.75
TTC3-220ENST00000487711 LSM4Q9Y4Z0 139 aaKnown RBP4.15□□□□□ -1.75
TTC3-220ENST00000487711 A0A0U1RQJ8 604 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 LRRC53A6NM62 1247 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 SNAP23O00161 211 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 ACOT8O14734 319 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 LDLRAD4O15165 306 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 TNFSF14O43557 240 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 ZIC3O60481 467 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 MMP2P08253 660 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 FGF3P11487 239 aaPredicted RBP4.14□□□□□ -1.75
TTC3-220ENST00000487711 ATP1A3P13637 1013 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 ITGAXP20702 1163 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 AGAP20933 346 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 GABRB2P47870 512 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 HARS2P49590 506 aaKnown RBP4.14□□□□□ -1.75
TTC3-220ENST00000487711 PEX5P50542 639 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 ART1P52961 327 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 DDR1Q08345 913 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 G3BP1Q13283 466 aaKnown RBP eCLIP4.14□□□□□ -1.75
TTC3-220ENST00000487711 DHX34Q14147 1143 aaKnown RBP4.14□□□□□ -1.75
TTC3-220ENST00000487711 IZUMO4Q1ZYL8 232 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 MMEL1Q495T6 779 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 XKR9Q5GH70 373 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 CAPRIN2Q6IMN6 1127 aaKnown RBP4.14□□□□□ -1.75
TTC3-220ENST00000487711 LCTLQ6UWM7 567 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 NAXEQ8NCW5 288 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 BEST2Q8NFU1 509 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 CADM4Q8NFZ8 388 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 RTP4Q96DX8 246 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 MTBPQ96DY7 904 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 DDX4Q9NQI0 724 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms