RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CBX8Q9HC52 389 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 ETNK2Q9NVF9 386 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 SALL4Q9UJQ4 1053 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 ATP8A1Q9Y2Q0 1164 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 OR1A2Q9Y585 309 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 SCINQ9Y6U3 715 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 SYCE3A1L190 88 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 TPP1O14773 563 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 YY2O15391 372 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 LZTS3O60299 673 aaPredicted RBP18.69■□□□□ 0.58
CLK1-211ENST00000481641 USP12O75317 370 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 PCCBP05166 539 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 AMPD1P23109 780 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 MMP12P39900 470 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 CSNK1DP48730 415 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 SUOXP51687 545 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 PPARDQ03181 441 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 IL10RBQ08334 325 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 INPP5AQ14642 412 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 NR0B2Q15466 257 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 HGSNATQ68CP4 663 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 KCTD16Q68DU8 428 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 TXNRD3NBQ6F5E7 133 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 BRAT1Q6PJG6 821 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 RD3Q7Z3Z2 195 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 LUZP1Q86V48 1076 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 HID1Q8IV36 788 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 SLC35F3Q8IY50 421 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 PLA2G15Q8NCC3 412 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 HSPH1Q92598 858 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 BTBD6Q96KE9 485 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 BBC3Q96PG8 261 aaPredicted RBP18.69■□□□□ 0.58
CLK1-211ENST00000481641 DEPDC7Q96QD5 511 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLK1-211ENST00000481641 APOOQ9BUR5 198 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 BOCQ9BWV1 1114 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 EDEM3Q9BZQ6 932 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 ATP13A3Q9H7F0 1226 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 ZWILCHQ9H900 591 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 EVA1BQ9NVM1 165 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 RAI2Q9Y5P3 530 aa18.69■□□□□ 0.58
CLK1-211ENST00000481641 COL27A1Q8IZC6 1860 aaPredicted RBP18.69■□□□□ 0.58
CLK1-211ENST00000481641 BPTFQ12830 3046 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 EME2A4GXA9 379 aaPredicted RBP18.68■□□□□ 0.58
CLK1-211ENST00000481641 A8MX80 341 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 LMO7DNF2Z398 122 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 ANXA6P08133 673 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 MYBL1P10243 752 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 SERPINA4P29622 427 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 HCAR3P49019 387 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 SCNN1BP51168 640 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 FANCCQ00597 558 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 BCL2L1Q07817 233 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 SLC10A7Q0GE19 358 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 RALGDSQ12967 914 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 ALG11Q2TAA5 492 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 TDRD12Q587J7 1177 aaKnown RBP18.68■□□□□ 0.58
CLK1-211ENST00000481641 ENPP7Q6UWV6 458 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 LRRC69Q6ZNQ3 347 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 PSTKQ8IV42 348 aaKnown RBP18.68■□□□□ 0.58
CLK1-211ENST00000481641 CPLX3Q8WVH0 158 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 FGF11Q92914 225 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 TRIM11Q96F44 468 aa18.68■□□□□ 0.58
CLK1-211ENST00000481641 MRPL47Q9HD33 250 aaKnown RBP18.68■□□□□ 0.58
CLK1-211ENST00000481641 TOR1BO14657 336 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 PCK1P35558 622 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 ACTN2P35609 894 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 PEX5P50542 639 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 HK3P52790 923 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 GABREP78334 506 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 LBRQ14739 615 aaKnown RBP18.67■□□□□ 0.58
CLK1-211ENST00000481641 NFATC4Q14934 902 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 TBC1D25Q3MII6 688 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 FIGNQ5HY92 759 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 C6orf132Q5T0Z8 1188 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 POLNQ7Z5Q5 900 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 PAF1Q8N7H5 531 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 SNIP1Q8TAD8 396 aaKnown RBP18.67■□□□□ 0.58
CLK1-211ENST00000481641 ECHDC3Q96DC8 303 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 THAP2Q9H0W7 228 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 SIRPGQ9P1W8 387 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 PTPRQQ9UMZ3 2332 aa18.67■□□□□ 0.58
CLK1-211ENST00000481641 LRP4O75096 1905 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 H3BRJ5 948 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 TRAFD1O14545 582 aaPredicted RBP18.66■□□□□ 0.58
CLK1-211ENST00000481641 RRP8O43159 456 aaKnown RBP18.66■□□□□ 0.58
CLK1-211ENST00000481641 RECQL5O94762 991 aaPredicted RBP18.66■□□□□ 0.58
CLK1-211ENST00000481641 RARAP10276 462 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 PBX1P40424 430 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 NSUN2Q08J23 767 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLK1-211ENST00000481641 RFTN1Q14699 578 aaPredicted RBP18.66■□□□□ 0.58
CLK1-211ENST00000481641 DPYSL2Q16555 572 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 KIF26BQ2KJY2 2108 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 ISXQ2M1V0 245 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 LIPIQ6XZB0 460 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 PGBD5Q8N414 524 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 NAF1Q96HR8 494 aaKnown RBP18.66■□□□□ 0.58
CLK1-211ENST00000481641 TBATAQ96M53 351 aa18.66■□□□□ 0.58
CLK1-211ENST00000481641 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 446.4 ms