RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 USP45Q70EL2 814 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 IQCKQ8N0W5 287 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 RIBC1Q8N443 379 aaPredicted RBP10.23□□□□□ -0.77
USP39-215ENST00000481409 TTC8Q8TAM2 541 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 GSDMBQ8TAX9 411 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 STYXQ8WUJ0 223 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 UBLCP1Q8WVY7 318 aaPredicted RBP10.23□□□□□ -0.77
USP39-215ENST00000481409 PIH1D2Q8WWB5 315 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 SORCS1Q8WY21 1168 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 CDKL2Q92772 493 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 RAB7BQ96AH8 199 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 RMDN1Q96DB5 314 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 SCRN2Q96FV2 425 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 SGSM3Q96HU1 749 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 EXOC2Q96KP1 924 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 RUFY1Q96T51 708 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 OSBPL6Q9BZF3 934 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 TNKS2Q9H2K2 1166 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 SEMA4AQ9H3S1 761 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 ZDHHC6Q9H6R6 413 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 LRRC4CQ9HCJ2 640 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 NSMCE4AQ9NXX6 385 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 NINJ2Q9NZG7 142 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.23□□□□□ -0.77
USP39-215ENST00000481409 CHKBQ9Y259 395 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 TCAF1Q9Y4C2 921 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 PCDHB9Q9Y5E1 797 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 PCDHGC4Q9Y5F7 938 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 MAD1L1Q9Y6D9 718 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 STON1Q9Y6Q2 735 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 FAM169AQ9Y6X4 670 aa10.23□□□□□ -0.77
USP39-215ENST00000481409 REV3LO60673 3130 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 A0A0J9YYE9 177 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 MROH6A6NGR9 719 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 F5H423 210 aaPredicted RBP10.22□□□□□ -0.77
USP39-215ENST00000481409 ATG13O75143 517 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 USP12O75317 370 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 AVILO75366 819 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 ADH1BP00325 375 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 TRBC1P01850 177 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 EPHX1P07099 455 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 ASGR2P07307 311 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 CYP2A6P11509 494 aaPredicted RBP10.22□□□□□ -0.77
USP39-215ENST00000481409 PRKCHP24723 683 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 ITGB7P26010 798 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 HADHAP40939 763 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 IL12RB1P42701 662 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 SOX9P48436 509 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 STARD6P59095 220 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 TFF2Q03403 129 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 ACVR1Q04771 509 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 CCINQ13939 588 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 SLC29A2Q14542 456 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 IHHQ14623 411 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 PON2Q15165 354 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 KYNUQ16719 465 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 SYCP2LQ5T4T6 812 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 EGFLAMQ63HQ2 1017 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 FSTL4Q6MZW2 842 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 TXNDC11Q6PKC3 985 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 TPRG1Q6ZUI0 275 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 CAMK1DQ8IU85 385 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 CHPFQ8IZ52 775 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 PAF1Q8N7H5 531 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
USP39-215ENST00000481409 ST13P5Q8NFI4 369 aaPredicted RBP10.22□□□□□ -0.77
USP39-215ENST00000481409 CALML6Q8TD86 181 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 DTX3LQ8TDB6 740 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 C9orf72Q96LT7 481 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 MCCC1Q96RQ3 725 aaPredicted RBP10.22□□□□□ -0.77
USP39-215ENST00000481409 CYTH2Q99418 400 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 IER2Q9BTL4 223 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 CDH19Q9H159 772 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 ACSS3Q9H6R3 686 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 VPS37BQ9H9H4 285 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 DYRK4Q9NR20 520 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 RAD18Q9NS91 495 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 SYBUQ9NX95 663 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 KCTD5Q9NXV2 234 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 PPM1HQ9ULR3 514 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 CHMP2BQ9UQN3 213 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 WASF2Q9Y6W5 498 aa10.22□□□□□ -0.77
USP39-215ENST00000481409 CKAP5Q14008 2032 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 MYO10Q9HD67 2058 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 RGSL1A5PLK6 1076 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 CAPN8A6NHC0 703 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 CHURC1-FNTBB4DL54 471 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 H0Y858 1186 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 H7C0S8 307 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 PSMD11O00231 422 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 OPA1O60313 960 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 SIN3BO75182 1162 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 LEFTY1O75610 366 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 CHRM1P11229 460 aaPredicted RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 LPOP22079 712 aaPredicted RBP10.21□□□□□ -0.77
USP39-215ENST00000481409 HMGCLP35914 325 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 IFFO1Q0D2I5 559 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 ELP6Q0PNE2 266 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 MESP2Q0VG99 397 aa10.21□□□□□ -0.77
USP39-215ENST00000481409 CRYMQ14894 314 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms