RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 GCKP35557 465 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 SLC11A2P49281 568 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 MNX1P50219 401 aaPredicted RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 PRKAA1Q13131 559 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 ZNF235Q14590 738 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 HECTD3Q5T447 861 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 PTAR1Q7Z6K3 402 aaPredicted RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 ULK2Q8IYT8 1036 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 PSKH2Q96QS6 385 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 MAN1C1Q9NR34 630 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 OR51F1A6NGY5 319 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 ALDH7A1P49419 539 aaKnown RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 APLP1P51693 650 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 CDKN2DP55273 166 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 RPS24P62847 133 aaKnown RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 TIAL1Q01085 375 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUP188-205ENST00000477069 BTKQ06187 659 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 GALNT3Q14435 633 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 TMEM207Q6UWW9 146 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 CHST9Q7L1S5 443 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 NET1Q7Z628 596 aaPredicted RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 DENND1CQ8IV53 801 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 SCUBE1Q8IWY4 988 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 GABPB2Q8TAK5 448 aaPredicted RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 SH3RF2Q8TEC5 729 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 ANKRD49Q8WVL7 239 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 TRMT2BQ96GJ1 504 aaKnown RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 ZNF512Q96ME7 567 aaPredicted RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 UNKQ9C0B0 810 aaKnown RBP11.56□□□□□ -0.56
NUP188-205ENST00000477069 ARL5AQ9Y689 179 aa11.56□□□□□ -0.56
NUP188-205ENST00000477069 A0A088AWK7 358 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 F8W8V4 182 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 PSMA3P25788 255 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 RGRP47804 291 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 KPNA2P52292 529 aaKnown RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 SEMA3AQ14563 771 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.55□□□□□ -0.56
NUP188-205ENST00000477069 ZNF461Q8TAF7 563 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 BRSK1Q8TDC3 778 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 WBP2Q969T9 261 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 IFT43Q96FT9 208 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 CLPTM1LQ96KA5 538 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 CNDP1Q96KN2 507 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 ZNF570Q96NI8 536 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 TACO1Q9BSH4 297 aaKnown RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 KLF16Q9BXK1 252 aaPredicted RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 RNF38Q9H0F5 515 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 TCF7L2Q9NQB0 619 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.55□□□□□ -0.567e-10■■■■■ 33.2
NUP188-205ENST00000477069 SLC7A8Q9UHI5 535 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 TRIM17Q9Y577 477 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 DENND4CQ5VZ89 1909 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 CLDN11O75508 207 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 KRT36O76013 467 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 SNUPNO95149 360 aaKnown RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 PSMG1O95456 288 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 SOD2P04179 222 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 LTA4HP09960 611 aaKnown RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 TFEBP19484 476 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 KCNA5P22460 613 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 ATP5F1P24539 256 aaPredicted RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 SERPINB5P36952 375 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 SLC26A3P40879 764 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 COPAP53621 1224 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 SLC12A2P55011 1212 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 DSG1Q02413 1049 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 CSHL1Q14406 222 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 SEL1L3Q68CR1 1132 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 ZNF549Q6P9A3 640 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 DEFB128Q7Z7B8 93 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 LDB1Q86U70 411 aaPredicted RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 POU5F2Q8N7G0 328 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 KDM1BQ8NB78 822 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 AGR3Q8TD06 166 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 TSPAN17Q96FV3 270 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 DNAJC1Q96KC8 554 aaKnown RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 TBATAQ96M53 351 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 FAM161BQ96MY7 647 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 PANX3Q96QZ0 392 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 PPP1R12CQ9BZL4 782 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 RC3H2Q9HBD1 1191 aaKnown RBP11.55□□□□□ -0.56
NUP188-205ENST00000477069 VTI1BQ9UEU0 232 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 SEPT3Q9UH03 358 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 STOML2Q9UJZ1 356 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 TBC1D30Q9Y2I9 924 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 VWA7Q9Y334 891 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 PTPRSQ13332 1948 aa11.55□□□□□ -0.56
NUP188-205ENST00000477069 ILVBLA1L0T0 632 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 E9PBE3 544 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 SLCO1B7G3V0H7 640 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 KLHL41O60662 606 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 NDST3O95803 873 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 GOT2P00505 430 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 JUNP05412 331 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 SERPINF2P08697 491 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 FDXRP22570 491 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 CORO1AP31146 461 aaKnown RBP11.54□□□□□ -0.56
NUP188-205ENST00000477069 SUOXP51687 545 aa11.54□□□□□ -0.56
NUP188-205ENST00000477069 ASPHQ12797 758 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms