RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 BEST2Q8NFU1 509 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 B4GALNT2Q8NHY0 566 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 MAGEC3Q8TD91 643 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 OIT3Q8WWZ8 545 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 FAM149B1Q96BN6 582 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 NOTCH4Q99466 2003 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 MXRA8Q9BRK3 442 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 SLC26A6Q9BXS9 759 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 AGXT2Q9BYV1 514 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 CD93Q9NPY3 652 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 CYSLTR2Q9NS75 346 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 INSL5Q9Y5Q6 135 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 PTGDR2Q9Y5Y4 395 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 A3GALT2U3KPV4 340 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 A0A0U1RQJ8 604 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 EME2A4GXA9 379 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 KLRF2D3W0D1 207 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 TNFSF14O43557 240 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 TACC1O75410 805 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 VNN2O95498 520 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 AGR2O95994 175 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 TFP02787 698 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 MMP2P08253 660 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 HSPA1AP0DMV8 641 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 HSPA1BP0DMV9 641 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 TGFB3P10600 412 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 DAOP14920 347 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 GGT5P36269 586 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 THPOP40225 353 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 SEC61A1P61619 476 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 RPL7AP62424 266 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 ABATP80404 500 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 TRAF1Q13077 416 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 HNF4GQ14541 408 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 PPP2R5BQ15173 497 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 RNPS1Q15287 305 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 CCNG2Q16589 344 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 KRT24Q2M2I5 525 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 ESCO2Q56NI9 601 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 PRAMEF19Q5SWL8 479 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 CES5AQ6NT32 575 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 CCDC129Q6ZRS4 1044 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 MEPCEQ7L2J0 689 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 LINGO2Q7L985 606 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 SLC46A3Q7Z3Q1 461 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 CERS3Q8IU89 383 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 SPATA2LQ8IUW3 424 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 ZCCHC9Q8N567 271 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 PARP16Q8N5Y8 322 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 AADATQ8N5Z0 425 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 PLD5Q8N7P1 536 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 AGBL3Q8NEM8 1001 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 ASB5Q8WWX0 329 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 TXNDC15Q96J42 360 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 KLHL15Q96M94 604 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 C7orf26Q96N11 449 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 SLITRK1Q96PX8 696 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 SH3GL2Q99962 352 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 ZPBPQ9BS86 351 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 SLC25A33Q9BSK2 321 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 TM6SF1Q9BZW5 370 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 HIPK2Q9H2X6 1198 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 ZHX3Q9H4I2 956 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 CLK4Q9HAZ1 481 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 BPIFA1Q9NP55 256 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 OR6C3Q9NZP0 311 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 HSPB7Q9UBY9 170 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 KDM3AQ9Y4C1 1321 aa3.39□□□□□ -1.87
ECHDC1-213ENST00000474240 A0A1B0GVT2 93 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 A0A1W2PQM1 296 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 A0A1W2PRG0 241 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 F5H0A9 414 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 J3KRW8 73 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 ACOT8O14734 319 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 EPB41L2O43491 1005 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 CH25HO95992 272 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 NGFRP08138 427 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 FCGR1AP12314 374 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 ETFAP13804 333 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 EPHA8P29322 1005 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 CDAP32320 146 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 BSGP35613 385 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 PCYT1AP49585 367 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 MXI1P50539 228 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 CLCN5P51795 746 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 RARSP54136 660 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 CASP6P55212 293 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 ZXDBP98169 803 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 LTBQ06643 244 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 GOLGA8DPQ0D2H9 430 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 ERV3-1Q14264 604 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 MYBPC2Q14324 1141 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 PLCB4Q15147 1175 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 C6orf141Q5SZD1 244 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 SLC9C2Q5TAH2 1124 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 TYW3Q6IPR3 259 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 SHFQ7M4L6 423 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 FJX1Q86VR8 437 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 HEATR4Q86WZ0 1026 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms