RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SENP6Q9GZR1 1112 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 MCOLN1Q9GZU1 580 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 IL22Q9GZX6 179 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 UPF3AQ9H1J1 476 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 GBA3Q9H227 469 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF552Q9H707 407 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 ARHGEF3Q9NR81 526 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 THAP1Q9NVV9 213 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 GFOD1Q9NXC2 390 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 FLRT1Q9NZU1 646 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 SLC17A7Q9P2U7 560 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 FBXW11Q9UKB1 542 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 FBXL21Q9UKT6 434 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 VANGL2Q9ULK5 521 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 SORCS3Q9UPU3 1222 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 SQORQ9Y6N5 450 aa5.98□□□□□ -1.45
ATPAF1-204ENST00000474020 PDE4DIPQ5VU43 2346 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 GOLGA8QA0A0J9YX86 632 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 GOLGA8OA6NCC3 632 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CASTOR2A6NHX0 329 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ARHGAP42A6NI28 874 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 E7ENQ6 273 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 GOLGA8NF8WBI6 632 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CLDN5O00501 218 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 SCAMP3O14828 347 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 DCLK1O15075 740 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 TNRC18O15417 2968 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 GYG2O15488 501 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 SEPT4O43236 478 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 FKTNO75072 461 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF623O75123 536 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 B3GAT3O94766 335 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 USP1O94782 785 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 LUC7L3O95232 432 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 AP2A1O95782 977 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 BPGMP07738 259 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CYBAP13498 195 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 VAV1P15498 845 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ERCC2P18074 760 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 PTPN3P26045 913 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 MGAT1P26572 445 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 PSMB4P28070 264 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 HOXD10P28358 340 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 TYK2P29597 1187 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CCR1P32246 355 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 BMP8BP34820 402 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 MAP2K2P36507 400 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CXCR3P49682 368 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CLCNKBP51801 687 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ATXN1P54253 815 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 PRKAA2P54646 552 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 GEMP55040 296 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CSE1LP55060 971 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 MXRA7P84157 204 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 GALNT2Q10471 571 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CDH17Q12864 832 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 SLC10A2Q12908 348 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 TUSC3Q13454 348 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 LAMB3Q13751 1172 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CRYMQ14894 314 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 KRT72Q14CN4 511 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CHI3L2Q15782 390 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 SLC14A2Q15849 920 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CCDC6Q16204 474 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 KCNA10Q16322 511 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 NFE2Q16621 373 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CCL14Q16627 93 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 PREPLQ4J6C6 727 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 DNAL1Q4LDG9 190 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 RAB6CQ53S08 254 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 TAF1BQ53T94 588 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 RAB41Q5JT25 222 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF618Q5T7W0 954 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 MROH9Q5TGP6 573 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 PDPK2PQ6A1A2 396 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 RWDD4Q6NW29 188 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CXCL17Q6UXB2 119 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 PACS1Q6VY07 963 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CLNKQ7Z7G1 428 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF605Q86T29 641 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 RNF180Q86T96 592 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 MTDHQ86UE4 582 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 LCA5Q86VQ0 697 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF567Q8N184 647 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 KIF2BQ8N4N8 673 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ARRDC4Q8NCT1 418 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 PPHLN1Q8NEY8 458 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CFAP61Q8NHU2 1237 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 SH3TC2Q8TF17 1288 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF669Q96BR6 464 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 HDAC11Q96DB2 347 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 TBC1D31Q96DN5 1066 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 THOC1Q96FV9 657 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 CERS2Q96G23 380 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 PCED1BQ96HM7 432 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 OXNAD1Q96HP4 312 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 RILPQ96NA2 401 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 LGMNQ99538 433 aa5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 WDR83Q9BRX9 315 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-204ENST00000474020 COLEC11Q9BWP8 271 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms