RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 GEMP55040 296 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 RPS21P63220 83 aaKnown RBP20.11■□□□□ 0.81
SF1-213ENST00000472725 IHHQ14623 411 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 LYSMD4Q5XG99 296 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 ARHGEF18Q6ZSZ5 1173 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 RABEPKQ7Z6M1 372 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 HORMAD1Q86X24 394 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 ZSWIM9Q86XI8 627 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 CREG2Q8IUH2 290 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 KLHDC8BQ8IXV7 354 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 ATL2Q8NHH9 583 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 PDCD6IPQ8WUM4 868 aaKnown RBP20.11■□□□□ 0.81
SF1-213ENST00000472725 PIH1D2Q8WWB5 315 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 ASB12Q8WXK4 309 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 SCRN2Q96FV2 425 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 HSPA12BQ96MM6 686 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 SRPK1Q96SB4 655 aaKnown RBP20.11■□□□□ 0.81
SF1-213ENST00000472725 DMTF1Q9Y222 760 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 MEI4A8MW99 385 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 FANCGO15287 622 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 PSMD3O43242 534 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 PCDH8O95206 1070 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 EPN2O95208 641 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 PRLP01236 227 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 CYP2A6P11509 494 aaPredicted RBP20.1■□□□□ 0.81
SF1-213ENST00000472725 FNTAP49354 379 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 DHPSP49366 369 aaPredicted RBP20.1■□□□□ 0.81
SF1-213ENST00000472725 CDK18Q07002 472 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 SNX1Q13596 522 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 CCDC70Q6NSX1 233 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 USP45Q70EL2 814 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 SLC41A1Q8IVJ1 513 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 RAVER1Q8IY67 606 aaKnown RBP20.1■□□□□ 0.81
SF1-213ENST00000472725 CCDC89Q8N998 374 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 CCDC110Q8TBZ0 833 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 MAGOHBQ96A72 148 aaKnown RBP20.1■□□□□ 0.81
SF1-213ENST00000472725 BIRC7Q96CA5 298 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 IFT43Q96FT9 208 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 C16orf45Q96MC5 204 aaPredicted RBP20.1■□□□□ 0.81
SF1-213ENST00000472725 MCCC1Q96RQ3 725 aaPredicted RBP20.1■□□□□ 0.81
SF1-213ENST00000472725 PCDH12Q9NPG4 1184 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 FAM86C1Q9NVL1 165 aa20.1■□□□□ 0.81
SF1-213ENST00000472725 TRPM6Q9BX84 2022 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 FAM47DPA6NHR8 397 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 RNGTTO60942 597 aaKnown RBP20.09■□□□□ 0.81
SF1-213ENST00000472725 PHF2O75151 1096 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 MT-CYBP00156 380 aaPredicted RBP20.09■□□□□ 0.81
SF1-213ENST00000472725 IGHV4-34P06331 123 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 RETP07949 1114 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 CD27P26842 260 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 MMP12P39900 470 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 EPHB1P54762 984 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 GDF10P55107 478 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 TMEM259Q4ZIN3 620 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 SETMARQ53H47 684 aaPredicted RBP20.09■□□□□ 0.81
SF1-213ENST00000472725 PEAR1Q5VY43 1037 aaPredicted RBP20.09■□□□□ 0.81
SF1-213ENST00000472725 KDELC1Q6UW63 502 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 DPPA4Q7L190 304 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.09■□□□□ 0.81
SF1-213ENST00000472725 SPATA22Q8NHS9 363 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 CXorf40AQ8TE69 158 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 GRK7Q8WTQ7 553 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 RUNDC3BQ96NL0 473 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 TRIB3Q96RU7 358 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 LYSMD1Q96S90 227 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 AP1M1Q9BXS5 423 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 KCTD5Q9NXV2 234 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 PAK5Q9P286 719 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 SUSD2Q9UGT4 822 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 GMEB2Q9UKD1 530 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 CHKBQ9Y259 395 aa20.09■□□□□ 0.81
SF1-213ENST00000472725 A0A0J9YYE9 177 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 LOC285095A0A1B0GVY8 99 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 A0A1W2PPC4 97 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 A0A1W2PQU0 124 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 ERI2A8K979 691 aaKnown RBP20.08■□□□□ 0.81
SF1-213ENST00000472725 ANKRD66B4E2M5 251 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 CCDC188H7C350 402 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 SPINT1O43278 529 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 LRP3O75074 770 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 FSBPO95073 299 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 NDST3O95803 873 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 TRBC1P01850 177 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 PDHA1P08559 390 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 PSMB4P28070 264 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 FDFT1P37268 417 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 PTGER3P43115 390 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 WNT3AP56704 352 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 GSTA5Q7RTV2 222 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 CYP2U1Q7Z449 544 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 SYT12Q8IV01 421 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 OXNAD1Q96HP4 312 aaPredicted RBP20.08■□□□□ 0.81
SF1-213ENST00000472725 C1QTNF7Q9BXJ2 289 aa20.08■□□□□ 0.81
SF1-213ENST00000472725 WDFY4Q6ZS81 3184 aa20.07■□□□□ 0.8
SF1-213ENST00000472725 PRR5-ARHGAP8B1AHC4 643 aa20.07■□□□□ 0.8
SF1-213ENST00000472725 PSMD11O00231 422 aa20.07■□□□□ 0.8
SF1-213ENST00000472725 PMPCBO75439 489 aa20.07■□□□□ 0.8
SF1-213ENST00000472725 IFNB1P01574 187 aa20.07■□□□□ 0.8
SF1-213ENST00000472725 GNSP15586 552 aa20.07■□□□□ 0.8
SF1-213ENST00000472725 ZNF30P17039 623 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms