RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 RAMP2O60895 175 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 ALOX15P16050 662 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-221ENST00000469415 PPARGP37231 505 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-221ENST00000469415 RAB27AP51159 221 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 SCNN1BP51168 640 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 DSC3Q14574 896 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 MANEALQ5VSG8 457 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 TIGD7Q6NT04 549 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-221ENST00000469415 SCIMPQ6UWF3 145 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 RMDN1Q96DB5 314 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 VCXQ9H320 206 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 FAM96AQ9H5X1 160 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 STN1Q9H668 368 aaKnown RBP17.94■□□□□ 0.46
MCF2L-221ENST00000469415 UNCXA6NJT0 531 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 CKBP12277 381 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 FGFR3P22607 806 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 ZNF235Q14590 738 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 PGM2L1Q6PCE3 622 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 BNC2Q6ZN30 1099 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-221ENST00000469415 TMEM173Q86WV6 379 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-221ENST00000469415 LGI2Q8N0V4 545 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 LZTR1Q8N653 840 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 C2CD4AQ8NCU7 369 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-221ENST00000469415 MCMBPQ9BTE3 642 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 RGS18Q9NS28 235 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 TREX1Q9NSU2 369 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 MID2Q9UJV3 735 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 GPR39O43194 453 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 PSMD3O43242 534 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 CCNT2O60583 730 aaKnown RBP17.93■□□□□ 0.46
MCF2L-221ENST00000469415 PMLP29590 882 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 RPS24P62847 133 aaKnown RBP17.93■□□□□ 0.46
MCF2L-221ENST00000469415 KDELC1Q6UW63 502 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 PAF1Q8N7H5 531 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 LINC01599Q8WXQ3 324 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 KCNA7Q96RP8 456 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 SLC25A51Q9H1U9 297 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 BPIFA1Q9NP55 256 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 IGSF5Q9NSI5 407 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 VWA7Q9Y334 891 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 HEATR9A2RTY3 570 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 FKBP6O75344 327 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 LYNP07948 512 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 BTKQ06187 659 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 CDK18Q07002 472 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 DBN1Q16643 649 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 C16orf59Q7L2K0 433 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 CUZD1Q86UP6 607 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 EFHBQ8N7U6 833 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 NSUN5Q96P11 429 aaKnown RBP17.93■□□□□ 0.46
MCF2L-221ENST00000469415 SARS2Q9NP81 518 aaKnown RBP17.93■□□□□ 0.46
MCF2L-221ENST00000469415 ANKRD6Q9Y2G4 727 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 PCDHB5Q9Y5E4 795 aa17.93■□□□□ 0.46
MCF2L-221ENST00000469415 TARM1B6A8C7 271 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 KPNA6O60684 536 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 PEX11BO96011 259 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 APOA4P06727 396 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 MTTPP55157 894 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 ECT2LQ008S8 904 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 SULT2A1Q06520 285 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 PFKFB4Q16877 469 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 RNF19BQ6ZMZ0 732 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 TAS1R1Q7RTX1 841 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 DCP1BQ8IZD4 617 aaKnown RBP17.92■□□□□ 0.46
MCF2L-221ENST00000469415 MRPL57Q9BQC6 102 aaKnown RBP17.92■□□□□ 0.46
MCF2L-221ENST00000469415 RTKNQ9BST9 563 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 SMPD4Q9NXE4 827 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 NSMCE4AQ9NXX6 385 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 PCDHGB4Q9UN71 923 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 PCDHGB5Q9Y5G0 923 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 SDHDO14521 159 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 FAM163BP0C2L3 166 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 MYL4P12829 197 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 ETS2P15036 469 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 NELFEP18615 380 aaKnown RBP17.92■□□□□ 0.46
MCF2L-221ENST00000469415 ATP5F1P24539 256 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-221ENST00000469415 CRABP2P29373 138 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 PDAP1Q13442 181 aaKnown RBP17.92■□□□□ 0.46
MCF2L-221ENST00000469415 HABP4Q5JVS0 413 aaKnown RBP17.92■□□□□ 0.46
MCF2L-221ENST00000469415 TMCO4Q5TGY1 634 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 GKN1Q9NS71 199 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 UTP6Q9NYH9 597 aaKnown RBP17.92■□□□□ 0.46
MCF2L-221ENST00000469415 BTRCQ9Y297 605 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 TSC2P49815 1807 aa17.92■□□□□ 0.46
MCF2L-221ENST00000469415 TMEM88BA6NKF7 163 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 CYP2C18P33260 490 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 CDKN1CP49918 316 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 LINGO4Q6UY18 593 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 ZNF598Q86UK7 904 aaKnown RBP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 IMP4Q96G21 291 aaKnown RBP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 PCDHB8Q9UN66 801 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 TLR6Q9Y2C9 796 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 TLR5O60602 858 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 GOT2P00505 430 aaKnown RBP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 MMP2P08253 660 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 NSUN2Q08J23 767 aaKnown RBP eCLIP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 EIF4EBP2Q13542 120 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 HNRNPDQ14103 355 aaKnown RBP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 GK3PQ14409 553 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 SEMA3AQ14563 771 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms