RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 TAF12Q16514 161 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 TMEM95Q3KNT9 176 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 TMEM30BQ3MIR4 351 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 ANKRD45Q5TZF3 282 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 DGAT2L7PQ6IED9 249 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 SHFQ7M4L6 423 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 PAF1Q8N7H5 531 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 ZNF248Q8NDW4 579 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 OR4N2Q8NGD1 307 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 RASSF8Q8NHQ8 419 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 SCAMP5Q8TAC9 235 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 CSGALNACT1Q8TDX6 532 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 TAS1R2Q8TE23 839 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 AFG1LQ8WV93 481 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 NCSTNQ92542 709 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 TANKQ92844 425 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 C3orf49Q96BT1 292 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 TMEM19Q96HH6 336 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 KATNAL1Q9BW62 490 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 TAF1DQ9H5J8 278 aaPredicted RBP2.26□□□□□ -2.05
CCDC93-205ENST00000466171 FBRSL1Q9HCM7 1045 aaKnown RBP2.26□□□□□ -2.05
CCDC93-205ENST00000466171 SEPSECSQ9HD40 501 aaKnown RBP2.26□□□□□ -2.05
CCDC93-205ENST00000466171 WDR6Q9NNW5 1121 aaKnown RBP2.26□□□□□ -2.05
CCDC93-205ENST00000466171 THAP1Q9NVV9 213 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 RRN3Q9NYV6 651 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 C9orf78Q9NZ63 289 aaPredicted RBP2.26□□□□□ -2.05
CCDC93-205ENST00000466171 GPR52Q9Y2T5 361 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 CGNL1Q0VF96 1302 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 CPED1A4D0V7 1026 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 LILRA5A6NI73 299 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 IRAK2O43187 625 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 SEPT4O43236 478 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 EXTL3O43909 919 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 PYGLP06737 847 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 LYL1P12980 280 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 VEGFAP15692 232 aaPredicted RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 CHN1P15882 459 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 CTPS1P17812 591 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 RXRAP19793 462 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 TIMP3P35625 211 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 CCT5P48643 541 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 NR0B1P51843 470 aaKnown RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 PRKAA2P54646 552 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 SREBF2Q12772 1141 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 ZNF155Q12901 538 aaPredicted RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 CUL4BQ13620 913 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 DCTN1Q14203 1278 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 OASLQ15646 514 aaKnown RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 ATP13A5Q4VNC0 1218 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 LCE3CQ5T5A8 94 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 LIN54Q6MZP7 749 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 ARHGAP11AQ6P4F7 1023 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 MOGAT3Q86VF5 341 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 ZC3HC1Q86WB0 502 aaKnown RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 SLC44A2Q8IWA5 706 aaPredicted RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 SFTPA2Q8IWL1 248 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 FTSJ3Q8IY81 847 aaKnown RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 FSIP1Q8NA03 581 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 KBTBD3Q8NAB2 608 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 CREB3L4Q8TEY5 395 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 GOLGA1Q92805 767 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 RILPL2Q969X0 211 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 EID2BQ96D98 161 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 ZSCAN31Q96LW9 406 aaPredicted RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 TRAPPC9Q96Q05 1148 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 EIF2AK1Q9BQI3 630 aaKnown RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 ISCA1Q9BUE6 129 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 CXorf56Q9H5V9 222 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 ANKRD10Q9NXR5 420 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 TAAR2Q9P1P5 351 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 KIF17Q9P2E2 1029 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 SRP68Q9UHB9 627 aaKnown RBP2.25□□□□□ -2.05
CCDC93-205ENST00000466171 GTF2A1LQ9UNN4 478 aa2.25□□□□□ -2.05
CCDC93-205ENST00000466171 B9A039 149 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 H0Y3Z8 333 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 J3KR12 359 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 EIF3FO00303 357 aaPredicted RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 CAPN9O14815 690 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 WNT9BO14905 357 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 HSPA12AO43301 675 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SH3BP5O60239 455 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 WDHD1O75717 1129 aaPredicted RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 MTA2O94776 668 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 METTL18O95568 372 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 AGR2O95994 175 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SRCP12931 536 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 HSD3B1P14060 373 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 CNTFP26441 200 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 MARK3P27448 753 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ALDH4A1P30038 563 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 AVPR2P30518 371 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 GJC1P36383 396 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 AARSP49588 968 aaKnown RBP eCLIP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 FUT6P51993 359 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 PNLIPRP1P54315 467 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ARL4CP56559 192 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 PITX1P78337 314 aaPredicted RBP2.24□□□□□ -2.05
CCDC93-205ENST00000466171 ARHGAP8P85298 464 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 SLC20A2Q08357 652 aa2.24□□□□□ -2.05
CCDC93-205ENST00000466171 GOLGA8FQ08AF8 430 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms