RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TRA2AQ13595 282 aaKnown RBP eCLIP9.53□□□□□ -0.88
APP-213ENST00000464867 HIF1AQ16665 826 aa9.53□□□□□ -0.88
APP-213ENST00000464867 EDRF1Q3B7T1 1238 aa9.53□□□□□ -0.88
APP-213ENST00000464867 ZACNQ401N2 412 aa9.53□□□□□ -0.88
APP-213ENST00000464867 RABGAP1LQ5R372 815 aa9.53□□□□□ -0.88
APP-213ENST00000464867 TTC39BQ5VTQ0 682 aaPredicted RBP9.53□□□□□ -0.88
APP-213ENST00000464867 BHLHA9Q7RTU4 235 aa9.53□□□□□ -0.88
APP-213ENST00000464867 RD3Q7Z3Z2 195 aa9.53□□□□□ -0.88
APP-213ENST00000464867 CHSY1Q86X52 802 aa9.53□□□□□ -0.88
APP-213ENST00000464867 FAM129CQ86XR2 697 aa9.53□□□□□ -0.88
APP-213ENST00000464867 UNC5BQ8IZJ1 945 aa9.53□□□□□ -0.88
APP-213ENST00000464867 SH2D3CQ8N5H7 860 aa9.53□□□□□ -0.88
APP-213ENST00000464867 GPR156Q8NFN8 814 aa9.53□□□□□ -0.88
APP-213ENST00000464867 GRIN3AQ8TCU5 1115 aa9.53□□□□□ -0.88
APP-213ENST00000464867 ASB12Q8WXK4 309 aa9.53□□□□□ -0.88
APP-213ENST00000464867 MYEOVQ96EZ4 313 aa9.53□□□□□ -0.88
APP-213ENST00000464867 SERPINB11Q96P15 392 aa9.53□□□□□ -0.88
APP-213ENST00000464867 GSX2Q9BZM3 304 aa9.53□□□□□ -0.88
APP-213ENST00000464867 SLAMF7Q9NQ25 335 aa9.53□□□□□ -0.88
APP-213ENST00000464867 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
APP-213ENST00000464867 VPS28Q9UK41 221 aa9.53□□□□□ -0.88
APP-213ENST00000464867 PILRAQ9UKJ1 303 aa9.53□□□□□ -0.88
APP-213ENST00000464867 POLHQ9Y253 713 aa9.53□□□□□ -0.88
APP-213ENST00000464867 TLR6Q9Y2C9 796 aa9.53□□□□□ -0.88
APP-213ENST00000464867 TNRC6AQ8NDV7 1962 aaKnown RBP9.52□□□□□ -0.89
APP-213ENST00000464867 LOC101059948A0A1B0GTJ6 334 aa9.52□□□□□ -0.89
APP-213ENST00000464867 TMEM110-MUSTN1A8MSY1 372 aa9.52□□□□□ -0.89
APP-213ENST00000464867 H3BQV1 296 aa9.52□□□□□ -0.89
APP-213ENST00000464867 AP1G1O43747 822 aa9.52□□□□□ -0.89
APP-213ENST00000464867 NUDT21O43809 227 aaKnown RBP9.52□□□□□ -0.89
APP-213ENST00000464867 EIF5BO60841 1220 aaKnown RBP9.52□□□□□ -0.89
APP-213ENST00000464867 LRCH4O75427 683 aa9.52□□□□□ -0.89
APP-213ENST00000464867 TACC2O95359 2948 aa9.52□□□□□ -0.89
APP-213ENST00000464867 LCP1P13796 627 aa9.52□□□□□ -0.89
APP-213ENST00000464867 TACR2P21452 398 aa9.52□□□□□ -0.89
APP-213ENST00000464867 PGDP52209 483 aa9.52□□□□□ -0.89
APP-213ENST00000464867 KRT83P78385 493 aa9.52□□□□□ -0.89
APP-213ENST00000464867 BIRC2Q13490 618 aa9.52□□□□□ -0.89
APP-213ENST00000464867 DOC2BQ14184 412 aa9.52□□□□□ -0.89
APP-213ENST00000464867 C14orf28Q4W4Y0 310 aa9.52□□□□□ -0.89
APP-213ENST00000464867 ZRANB3Q5FWF4 1079 aa9.52□□□□□ -0.89
APP-213ENST00000464867 ATP1A1-AS1Q5TC04 95 aa9.52□□□□□ -0.89
APP-213ENST00000464867 RAP1GAP2Q684P5 730 aa9.52□□□□□ -0.89
APP-213ENST00000464867 ARHGAP17Q68EM7 881 aa9.52□□□□□ -0.89
APP-213ENST00000464867 SP5Q6BEB4 398 aaPredicted RBP9.52□□□□□ -0.89
APP-213ENST00000464867 NELFCDQ8IXH7 590 aa9.52□□□□□ -0.89
APP-213ENST00000464867 CCAR2Q8N163 923 aaKnown RBP9.52□□□□□ -0.89
APP-213ENST00000464867 FAM46DQ8NEK8 389 aa9.52□□□□□ -0.89
APP-213ENST00000464867 OR2A12Q8NGT7 310 aa9.52□□□□□ -0.89
APP-213ENST00000464867 ATL2Q8NHH9 583 aa9.52□□□□□ -0.89
APP-213ENST00000464867 PMEPA1Q969W9 287 aa9.52□□□□□ -0.89
APP-213ENST00000464867 ZSCAN31Q96LW9 406 aaPredicted RBP9.52□□□□□ -0.89
APP-213ENST00000464867 CCDC74BQ96LY2 380 aa9.52□□□□□ -0.89
APP-213ENST00000464867 FEM1AQ9BSK4 669 aa9.52□□□□□ -0.89
APP-213ENST00000464867 NIF3L1Q9GZT8 377 aa9.52□□□□□ -0.89
APP-213ENST00000464867 SLC12A6Q9UHW9 1150 aa9.52□□□□□ -0.89
APP-213ENST00000464867 FADS3Q9Y5Q0 445 aa9.52□□□□□ -0.89
APP-213ENST00000464867 CSMD2Q7Z408 3487 aa9.51□□□□□ -0.89
APP-213ENST00000464867 IGHV5-10-1A0A0J9YXX1 117 aa9.51□□□□□ -0.89
APP-213ENST00000464867 TCAF2A6NFQ2 919 aa9.51□□□□□ -0.89
APP-213ENST00000464867 B4E171 279 aa9.51□□□□□ -0.89
APP-213ENST00000464867 IKBKBO14920 756 aa9.51□□□□□ -0.89
APP-213ENST00000464867 TNFP01375 233 aa9.51□□□□□ -0.89
APP-213ENST00000464867 HLA-DRAP01903 254 aa9.51□□□□□ -0.89
APP-213ENST00000464867 ALDH4A1P30038 563 aa9.51□□□□□ -0.89
APP-213ENST00000464867 L1CAMP32004 1257 aa9.51□□□□□ -0.89
APP-213ENST00000464867 TSPAN7P41732 249 aa9.51□□□□□ -0.89
APP-213ENST00000464867 PMS2P54278 862 aa9.51□□□□□ -0.89
APP-213ENST00000464867 PER3P56645 1201 aa9.51□□□□□ -0.89
APP-213ENST00000464867 DAOAP59103 153 aa9.51□□□□□ -0.89
APP-213ENST00000464867 BST2Q10589 180 aaKnown RBP9.51□□□□□ -0.89
APP-213ENST00000464867 GOLGA7BQ2TAP0 167 aa9.51□□□□□ -0.89
APP-213ENST00000464867 NADK2Q4G0N4 442 aa9.51□□□□□ -0.89
APP-213ENST00000464867 TAF8Q7Z7C8 310 aa9.51□□□□□ -0.89
APP-213ENST00000464867 VPS36Q86VN1 386 aa9.51□□□□□ -0.89
APP-213ENST00000464867 C12orf56Q8IXR9 622 aa9.51□□□□□ -0.89
APP-213ENST00000464867 SCML4Q8N228 414 aa9.51□□□□□ -0.89
APP-213ENST00000464867 GOLGA5Q8TBA6 731 aa9.51□□□□□ -0.89
APP-213ENST00000464867 PLEKHO2Q8TD55 490 aa9.51□□□□□ -0.89
APP-213ENST00000464867 IRGQQ8WZA9 623 aa9.51□□□□□ -0.89
APP-213ENST00000464867 TSACCQ96A04 125 aaPredicted RBP9.51□□□□□ -0.89
APP-213ENST00000464867 RAB7BQ96AH8 199 aa9.51□□□□□ -0.89
APP-213ENST00000464867 ARHGEF26Q96DR7 871 aa9.51□□□□□ -0.89
APP-213ENST00000464867 FCRL2Q96LA5 508 aaPredicted RBP9.51□□□□□ -0.89
APP-213ENST00000464867 ZPBPQ9BS86 351 aa9.51□□□□□ -0.89
APP-213ENST00000464867 MUC3BQ9H195 1237 aa9.51□□□□□ -0.89
APP-213ENST00000464867 DPEP2Q9H4A9 486 aa9.51□□□□□ -0.89
APP-213ENST00000464867 PNMA8BQ9ULN7 279 aaPredicted RBP9.51□□□□□ -0.89
APP-213ENST00000464867 HS3ST2Q9Y278 367 aa9.51□□□□□ -0.89
APP-213ENST00000464867 OAS3Q9Y6K5 1087 aaKnown RBP9.51□□□□□ -0.89
APP-213ENST00000464867 CHD5Q8TDI0 1954 aa9.51□□□□□ -0.89
APP-213ENST00000464867 RHPN2P1A8MT19 583 aa9.5□□□□□ -0.89
APP-213ENST00000464867 TULP2O00295 520 aa9.5□□□□□ -0.89
APP-213ENST00000464867 LEFTY1O75610 366 aa9.5□□□□□ -0.89
APP-213ENST00000464867 SORBS2O94875 1100 aaKnown RBP9.5□□□□□ -0.89
APP-213ENST00000464867 LTFP02788 710 aa9.5□□□□□ -0.89
APP-213ENST00000464867 SRCP12931 536 aa9.5□□□□□ -0.89
APP-213ENST00000464867 PEX5P50542 639 aa9.5□□□□□ -0.89
APP-213ENST00000464867 OR1D5P58170 312 aa9.5□□□□□ -0.89
APP-213ENST00000464867 B4GALNT1Q00973 533 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms