RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 VANGL2Q9ULK5 521 aa7.25□□□□□ -1.25
CLSTN1-204ENST00000464286 AP4E1Q9UPM8 1137 aa7.25□□□□□ -1.25
CLSTN1-204ENST00000464286 ERGIC3Q9Y282 383 aa7.25□□□□□ -1.25
CLSTN1-204ENST00000464286 RNF11Q9Y3C5 154 aa7.25□□□□□ -1.25
CLSTN1-204ENST00000464286 THSD7AQ9UPZ6 1657 aa7.25□□□□□ -1.25
CLSTN1-204ENST00000464286 ZNF646O15015 1829 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 DHRS12A0PJE2 317 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 HTR3EA5X5Y0 456 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 TCAF2A6NFQ2 919 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 NEMP1O14524 444 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 MRASO14807 208 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 GRID2O43424 1007 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 KDM1AO60341 852 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 NRP2O60462 931 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 MSCO60682 206 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CLPXO76031 633 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 RASAL1O95294 804 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ZBTB11O95625 1053 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 AP2A1O95782 977 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 RBP1P09455 135 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 HOXC6P09630 235 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 HSD17B1P14061 328 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A6P19224 532 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A1P22309 533 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A4P22310 534 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 IL4RP24394 825 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ATP5F1P24539 256 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 GRNP28799 593 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A3P35503 534 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 UGT1A5P35504 534 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 HLCSP50747 726 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 GABARAPL2P60520 117 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 PLOD1Q02809 727 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 POU5F1BQ06416 359 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 TNK2Q07912 1038 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 MTM1Q13496 603 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CAPSQ13938 189 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 BAATQ14032 418 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 NR1D2Q14995 579 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 TARBP2Q15633 366 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ZYXQ15942 572 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 NRF1Q16656 503 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 KIZQ2M2Z5 673 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 SHROOM1Q2M3G4 852 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 HSDL1Q3SXM5 330 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ARL13AQ5H913 290 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 MTX3Q5HYI7 312 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 C1QTNF12Q5T7M4 302 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ATF7IP2Q5U623 682 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 FSTL4Q6MZW2 842 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ZNF773Q6PK81 442 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 KIAA0408Q6ZU52 694 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 TRMT1LQ7Z2T5 733 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CCDC60Q8IWA6 550 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CENPSQ8N2Z9 138 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 MPP5Q8N3R9 675 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 DNAAF3Q8N9W5 541 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CALML6Q8TD86 181 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 LPGAT1Q92604 370 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CENPIQ92674 756 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ATP6V1E2Q96A05 226 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 SDCCAG3Q96C92 435 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 HPDLQ96IR7 371 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 VPS39Q96JC1 886 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ZBTB45Q96K62 511 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CSPG4P5Q96PW8 444 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ZNF347Q96SE7 839 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 TSPAN18Q96SJ8 248 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 BDH2Q9BUT1 245 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 NPLQ9BXD5 320 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 NFKBIZQ9BYH8 718 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ELOVL4Q9GZR5 314 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 RAD21L1Q9H4I0 556 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 RPF2Q9H7B2 306 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ACAD9Q9H845 621 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 QTRT2Q9H974 415 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 GPN2Q9H9Y4 310 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 ANLNQ9NQW6 1124 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 FBXO28Q9NVF7 368 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 TBC1D13Q9NVG8 400 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 INTS10Q9NVR2 710 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CACNA2D2Q9NY47 1150 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 SMPD3Q9NY59 655 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 KLK14Q9P0G3 267 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 TMEM181Q9P2C4 612 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 KLHL8Q9P2G9 620 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 PSME2Q9UL46 239 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 CNOT6Q9ULM6 557 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 STAP1Q9ULZ2 295 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 TNFSF13BQ9Y275 285 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 AP3M1Q9Y2T2 418 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 DERAQ9Y315 318 aa7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 FAM32AQ9Y421 112 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 COPG1Q9Y678 874 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-204ENST00000464286 IGKV6D-21A0A0A0MT36 114 aa7.23□□□□□ -1.25
CLSTN1-204ENST00000464286 TCP10L2B9ZVM9 353 aa7.23□□□□□ -1.25
CLSTN1-204ENST00000464286 CLDN25C9JDP6 229 aa7.23□□□□□ -1.25
CLSTN1-204ENST00000464286 H0YIN7 160 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms