RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 MTCL1Q9Y4B5 1905 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 GJA1P17302 382 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CTRB1P17538 263 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 HPDP32754 393 aaPredicted RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 CD68P34810 354 aaPredicted RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 RPS24P62847 133 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 IFI35P80217 286 aaPredicted RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 GPM6BQ13491 265 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 GNA13Q14344 377 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 PRPSAP1Q14558 356 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 NR1D2Q14995 579 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 ADRM1Q16186 407 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 PLEKHG6Q3KR16 790 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 PARP15Q460N3 678 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CEP78Q5JTW2 689 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 ARMC4Q5T2S8 1044 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CTRB2Q6GPI1 263 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 ZNF534Q76KX8 674 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 WBP2Q969T9 261 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 PABPC5Q96DU9 382 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 SAMD11Q96NU1 681 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 AIFM2Q9BRQ8 373 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 WDR83Q9BRX9 315 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 LRRC3Q9BY71 257 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CERS4Q9HA82 394 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CCDC177Q9NQR7 707 aaPredicted RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 HCFC1R1Q9NWW0 138 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 ZNF212Q9UDV6 495 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 NOVA2Q9UNW9 492 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 MAD1L1Q9Y6D9 718 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 TRAV19A0A0A6YYK7 116 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 TYW5A2RUC4 315 aaKnown RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 CCDC85CA6NKD9 419 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 FAM47E-STBD1D6RA91 191 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 PER2O15055 1255 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 TSPAN3O60637 253 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 TMCC2O75069 709 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 SEC24DO94855 1032 aaPredicted RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 EIF2S1P05198 315 aaKnown RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 EPCAMP16422 314 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 NUMBP49757 651 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 CDH4P55283 916 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 YBEYP58557 167 aaPredicted RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 GPX6P59796 221 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 SPARCL1Q14515 664 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 C5orf22Q49AR2 442 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 STXBP5Q5T5C0 1151 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 C6orf183Q5T699 404 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 AGBL2Q5U5Z8 902 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 CASC4Q6P4E1 433 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 RTL10Q7L3V2 364 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 RBM23Q86U06 439 aaKnown RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 IGDCC3Q8IVU1 814 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 CNTD1Q8N815 330 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 ZSCAN18Q8TBC5 510 aaPredicted RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 LRRC39Q96DD0 335 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 PGM2Q96G03 612 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 PRICKLE1Q96MT3 831 aaPredicted RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 STMN4Q9H169 189 aaPredicted RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 FAIMQ9NVQ4 179 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 RBM22Q9NW64 420 aaKnown RBP eCLIP10.47□□□□□ -0.73
HERC4-207ENST00000460168 PIH1D1Q9NWS0 290 aaKnown RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 SIRT5Q9NXA8 310 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 UBP1Q9NZI7 540 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 LSM7Q9UK45 103 aaKnown RBP10.47□□□□□ -0.73
HERC4-207ENST00000460168 LRRC42Q9Y546 428 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 PCDHA11Q9Y5I1 949 aa10.47□□□□□ -0.73
HERC4-207ENST00000460168 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.46□□□□□ -0.73
HERC4-207ENST00000460168 A0A1B0GVM2 712 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 TCAF2A6NFQ2 919 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 TRIM64A6NGJ6 449 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 TRIM64BA6NI03 449 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 ERI2A8K979 691 aaKnown RBP10.46□□□□□ -0.73
HERC4-207ENST00000460168 POC1B-GALNT4F8VUJ3 575 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 GOLGA8TH3BQL2 631 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 J3KR12 359 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 RNGTTO60942 597 aaKnown RBP10.46□□□□□ -0.73
HERC4-207ENST00000460168 CDH16O75309 829 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 USP12O75317 370 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 CLDN11O75508 207 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 AP2A1O95782 977 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 MLNP12872 115 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 NAGAP17050 411 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 NR1D1P20393 614 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 PBX2P40425 430 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 MAGEA3P43357 314 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 SCTRP47872 440 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 RENBPP51606 427 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 MAGOHP61326 146 aaKnown RBP10.46□□□□□ -0.73
HERC4-207ENST00000460168 ZXDBP98169 803 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 ZNF177Q13360 481 aaPredicted RBP10.46□□□□□ -0.73
HERC4-207ENST00000460168 HNRNPDQ14103 355 aaKnown RBP10.46□□□□□ -0.73
HERC4-207ENST00000460168 MARC1Q5VT66 337 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 RNF220Q5VTB9 566 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 METTL11BQ5VVY1 283 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 LRRC8BQ6P9F7 803 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 OTOP3Q7RTS5 596 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 DNAAF3Q8N9W5 541 aa10.46□□□□□ -0.73
HERC4-207ENST00000460168 STARD8Q92502 1023 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms