RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PPIDQ08752 370 aaKnown RBP15.91■□□□□ 0.14
CMTM3-203ENST00000460097 MTM1Q13496 603 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 PDE1CQ14123 709 aaPredicted RBP15.91■□□□□ 0.14
CMTM3-203ENST00000460097 FRG1Q14331 258 aaKnown RBP15.91■□□□□ 0.14
CMTM3-203ENST00000460097 ZNF423Q2M1K9 1284 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 TCHHL1Q5QJ38 904 aaPredicted RBP15.91■□□□□ 0.14
CMTM3-203ENST00000460097 HSPH1Q92598 858 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 NECTIN4Q96NY8 510 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 ASB2Q96Q27 587 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 ZNF670Q9BS34 389 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 MRPL1Q9BYD6 325 aaKnown RBP15.91■□□□□ 0.14
CMTM3-203ENST00000460097 GRIP2Q9C0E4 1043 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 EIF2B3Q9NR50 452 aaKnown RBP15.91■□□□□ 0.14
CMTM3-203ENST00000460097 BLOC1S6Q9UL45 172 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 SH3GLB1Q9Y371 365 aa15.91■□□□□ 0.14
CMTM3-203ENST00000460097 LYPLA1O75608 230 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 BCAS2O75934 225 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 APRTP07741 180 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PTPN2P17706 415 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 GRIK1P39086 918 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PSMD8P48556 350 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 ERFP50548 548 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 KCNQ1P51787 676 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PRKAA2P54646 552 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 CBX2Q14781 532 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 DDR2Q16832 855 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 TRMT10BQ6PF06 316 aaKnown RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 NPNTQ6UXI9 565 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PACS1Q6VY07 963 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 BNC2Q6ZN30 1099 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 Q6ZNX1 250 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 GRASPQ7Z6J2 395 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 SCN4BQ8IWT1 228 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 CHERPQ8IWX8 916 aaKnown RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PGAM4Q8N0Y7 254 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 TAB3Q8N5C8 712 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 HM13Q8TCT9 377 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 SLC2A14Q8TDB8 520 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 SREK1Q8WXA9 508 aaKnown RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PLGRKTQ9HBL7 147 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 MRPL40Q9NQ50 206 aaKnown RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 FAM49BQ9NUQ9 324 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 MRGBPQ9NV56 204 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PNPOQ9NVS9 261 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 CYTH4Q9UIA0 394 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 KIAA1257Q9ULG3 409 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 SH3PXD2BA1X283 911 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 ERBB2P04626 1255 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 ZFXP17010 805 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 GPD1P21695 349 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 CD97P48960 835 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 NR2C2P49116 596 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 NUP107P57740 925 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 VEPH1Q14D04 833 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 SMAD2Q15796 467 aaKnown RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PAQR9Q6ZVX9 377 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PHTF2Q8N3S3 785 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 ZBTB8BQ8NAP8 495 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PEBP4Q96S96 227 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 CPXM1Q96SM3 734 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 HNRNPABQ99729 332 aaKnown RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 FERMT1Q9BQL6 677 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PRDM16Q9HAZ2 1276 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 VPS45Q9NRW7 570 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 TUBA8Q9NY65 449 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 DNMT3BQ9UBC3 853 aaKnown RBP15.9■□□□□ 0.14
CMTM3-203ENST00000460097 PCSK1NQ9UHG2 260 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 MID2Q9UJV3 735 aa15.9■□□□□ 0.14
CMTM3-203ENST00000460097 TRIM64CA6NLI5 447 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 C2CD4BA6NLJ0 364 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 SORBS2O94875 1100 aaKnown RBP15.89■□□□□ 0.13
CMTM3-203ENST00000460097 SLC34A2O95436 690 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 ATF6P18850 670 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 IL4RP24394 825 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 RBL1P28749 1068 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 GARSP41250 739 aaKnown RBP15.89■□□□□ 0.13
CMTM3-203ENST00000460097 GPR15P49685 360 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 FLOT2Q14254 428 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 PPP1R26Q5T8A7 1209 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-203ENST00000460097 C16orf46Q6P387 395 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 DNAJB7Q7Z6W7 309 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-203ENST00000460097 ITIH5Q86UX2 942 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 FAM35AQ86V20 835 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 C10orf107Q8IVU9 208 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 PQLC3Q8N755 202 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 GIPC2Q8TF65 315 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 PSMG2Q969U7 264 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 DUS3LQ96G46 650 aaKnown RBP15.89■□□□□ 0.13
CMTM3-203ENST00000460097 SMARCD1Q96GM5 515 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 DNAJC1Q96KC8 554 aaKnown RBP15.89■□□□□ 0.13
CMTM3-203ENST00000460097 ZNF597Q96LX8 424 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 PRPF18Q99633 342 aaKnown RBP15.89■□□□□ 0.13
CMTM3-203ENST00000460097 OSBPL11Q9BXB4 747 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 ZNF385DQ9H6B1 395 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 WDR6Q9NNW5 1121 aaKnown RBP15.89■□□□□ 0.13
CMTM3-203ENST00000460097 HCFC1R1Q9NWW0 138 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 ITGB1BP2Q9UKP3 347 aa15.89■□□□□ 0.13
CMTM3-203ENST00000460097 CCDC160A6NGH7 325 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms