RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 LPGAT1Q92604 370 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 POP5Q969H6 163 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATP6V1E2Q96A05 226 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZUFSPQ96AP4 578 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 L3HYPDHQ96EM0 354 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 C19orf60Q96EN9 201 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SGF29Q96ES7 293 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CDCA5Q96FF9 252 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CELF6Q96J87 481 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAGED4Q96JG8 741 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 FEM1CQ96JP0 617 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MARK4Q96L34 752 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SENP8Q96LD8 212 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 UROC1Q96N76 676 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SERPINB11Q96P15 392 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 UHRF1Q96T88 793 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PARK7Q99497 189 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 IL12RB2Q99665 862 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 LPIN3Q9BQK8 851 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MCMBPQ9BTE3 642 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 NUSAP1Q9BXS6 441 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 OXCT2Q9BYC2 517 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRIM54Q9BYV2 358 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC2A11Q9BYW1 496 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ANKRD60Q9BZ19 345 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 OSBPL6Q9BZF3 934 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SENP6Q9GZR1 1112 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC25A51Q9H1U9 297 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SEMA6AQ9H2E6 1030 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TSPYL2Q9H2G4 693 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MFSD1Q9H3U5 465 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 COQ10BQ9H8M1 238 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SP110Q9HB58 689 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 POPDC3Q9HBV1 291 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SYTL2Q9HCH5 934 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYP4F12Q9HCS2 524 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 WDR6Q9NNW5 1121 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TXNRD2Q9NNW7 524 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CD320Q9NPF0 282 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CHST12Q9NRB3 414 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RGS18Q9NS28 235 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ABCC13Q9NSE7 274 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RIC8BQ9NVN3 520 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TBCCD1Q9NVR7 557 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARMC1Q9NVT9 282 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RBM22Q9NW64 420 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 IRAK4Q9NWZ3 460 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CACNA2D2Q9NY47 1150 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 UBAP1Q9NZ09 502 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 UBP1Q9NZI7 540 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PACSIN3Q9UKS6 424 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SARDHQ9UL12 918 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 VPS9D1Q9Y2B5 631 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 AP3M1Q9Y2T2 418 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRAF6Q9Y4K3 522 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 HES2Q9Y543 173 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 IPPQ9Y573 584 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PCDHGA7Q9Y5G6 932 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 NR2E3Q9Y5X4 410 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SHROOM3Q8TF72 1996 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PAPPA2Q9BXP8 1791 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 A0A0J9YYE9 177 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MBLAC1A4D2B0 266 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRXCR2A6NFK2 248 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TCAF2A6NFQ2 919 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SAC3D1A6NKF1 404 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 C16orf96A6NNT2 1141 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 YJEFN3A6XGL0 299 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 WASH4PA8MWX3 477 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM155AB1AL88 458 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SUPT3HB4E1H0 165 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TARM1B6A8C7 271 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM72CH0Y354 149 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 H3BNH8 94 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PDHXO00330 501 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 IFRD1O00458 451 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NRP1O14786 923 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRIM24O15164 1050 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 VILLO15195 856 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SPTLC1O15269 473 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLOCKO15516 846 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 IRAK2O43187 625 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 DYNC1LI2O43237 492 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HTRA2O43464 458 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HCRTO43612 131 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CACNG3O60359 315 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 KPNA6O60684 536 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNX2O60749 519 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CBFA2T3O75081 653 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PMPCBO75439 489 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SUPT3HO75486 399 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SOAT2O75908 522 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RHOBTB1O94844 696 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SUPT7LO94864 414 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 OR6B1O95007 311 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CSPG5O95196 566 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBTB7AO95365 584 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MATN4O95460 622 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MLYCDO95822 493 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GLP2RO95838 553 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms