RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, human

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM2-215	ENST00000456545	POM121B	A6NF01	834 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545		A8MX80	341 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	PPP1R12A	O14974	1030 aa	Predicted RBP	18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	RAD51B	O15315	384 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SPINT1	O43278	529 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SOCS5	O75159	536 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CP	P00450	1065 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	KRT10	P13645	584 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	LIG3	P49916	1009 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	VAV2	P52735	878 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	THOP1	P52888	689 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SLC10A2	Q12908	348 aa	Predicted RBP	18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	FOXC1	Q12948	553 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	BNIP3	Q12983	259 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	HS1BP3	Q53T59	392 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	ARMC12	Q5T9G4	340 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	C11orf63	Q6NUN7	778 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	MFSD7	Q6UXD7	560 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	KYAT3	Q6YP21	454 aa	Known RBP	18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	DBX2	Q6ZNG2	339 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	TEX26	Q8N6G2	289 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	DENND6B	Q8NEG7	585 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	TPCN2	Q8NHX9	752 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	KIAA1524	Q8TCG1	905 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	HDAC11	Q96DB2	347 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	ECHDC3	Q96DC8	303 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	AMACR	Q9UHK6	382 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	COQ6	Q9Y2Z9	468 aa		18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	TP53BP1	Q12888	1972 aa	Predicted RBP	18.2	■□□□□ 0.5
PDLIM2-215	ENST00000456545	C3orf70	A6NLC5	250 aa	Predicted RBP	18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	GOLGA8CP	A6NN73	597 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	TRAFD1	O14545	582 aa	Predicted RBP	18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	JCHAIN	P01591	159 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	C6	P13671	934 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CR2	P20023	1033 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	RXRG	P48443	463 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	GSDMD	P57764	484 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	KIF5A	Q12840	1032 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	PTK2B	Q14289	1009 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	LRRC14	Q15048	493 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	LLGL1	Q15334	1064 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SLC9A4	Q6AI14	798 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SPOCD1	Q6ZMY3	1216 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	ZSWIM9	Q86XI8	627 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	PLD5	Q8N7P1	536 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	MAML1	Q92585	1016 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	FATE1	Q969F0	183 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	RBM41	Q96IZ5	413 aa	Known RBP	18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	LGMN	Q99538	433 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	KLF6	Q99612	283 aa	Predicted RBP	18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	DNAJC28	Q9NX36	388 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SEPT10	Q9P0V9	454 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	PHTF1	Q9UMS5	762 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	APOBEC2	Q9Y235	224 aa	Known RBP	18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	DUSP10	Q9Y6W6	482 aa		18.19	■□□□□ 0.5
PDLIM2-215	ENST00000456545	KNL1	Q8NG31	2342 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	DCHS1	Q96JQ0	3298 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	RCCD1	A6NED2	376 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CST8	O60676	142 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SDC3	O75056	442 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	ELFN1	P0C7U0	828 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CYP2A6	P11509	494 aa	Predicted RBP	18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CA4	P22748	312 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	EPHA8	P29322	1005 aa	Predicted RBP	18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	MMP12	P39900	470 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CETN2	P41208	172 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	EPHB1	P54762	984 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	PPID	Q08752	370 aa	Known RBP	18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	PDE1C	Q14123	709 aa	Predicted RBP	18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	ACOX1	Q15067	660 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CCDC181	Q5TID7	509 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	NPNT	Q6UXI9	565 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	KATNAL2	Q8IYT4	538 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	EID2	Q8N6I1	236 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SAP25	Q8TEE9	199 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CENPT	Q96BT3	561 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	BRD8	Q9H0E9	1235 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	FTSJ1	Q9UET6	329 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	BTBD3	Q9Y2F9	522 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	RAI2	Q9Y5P3	530 aa		18.18	■□□□□ 0.5
PDLIM2-215	ENST00000456545	PCNX2	A6NKB5	2137 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CFAP69	A5D8W1	941 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	BTNL10	A8MVZ5	291 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	KCNK1	O00180	336 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	HTRA2	O43464	458 aa	Predicted RBP	18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	LDOC1	O95751	146 aa	Predicted RBP	18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	CDKN2B	P42772	138 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	NR2C2	P49116	596 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	YPEL5	P62699	121 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	DSC2	Q02487	901 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	TRAF2	Q12933	501 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	ARHGEF7	Q14155	803 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	SHB	Q15464	509 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	ZNF542P	Q5EBM4	170 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	TFDP3	Q5H9I0	405 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	DENND2C	Q68D51	928 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	DPPA4	Q7L190	304 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	EXD1	Q8NHP7	514 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	P3H4	Q92791	437 aa		18.17	■□□□□ 0.5
PDLIM2-215	ENST00000456545	NSMCE3	Q96MG7	304 aa		18.17	■□□□□ 0.5

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