RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 SLC11A1P49279 550 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 MTTPP55157 894 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 SATB1Q01826 763 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 GALNT1Q10472 559 aaPredicted RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 CSHL1Q14406 222 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 HERC3Q15034 1050 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 HECTD2Q5U5R9 776 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 ALG1LQ6GMV1 187 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 NADSYN1Q6IA69 706 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 ANO7Q6IWH7 933 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 CCNYL1Q8N7R7 359 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 HDAC10Q969S8 669 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 FAM136AQ96C01 138 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 NDNQ99608 321 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 TTLL2Q9BWV7 592 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 SHCBP1LQ9BZQ2 653 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 POMKQ9H5K3 350 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 PDFQ9HBH1 243 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 S100A14Q9HCY8 104 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 MRGBPQ9NV56 204 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 NDE1Q9NXR1 346 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 RIMKLBQ9ULI2 386 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 PRPF19Q9UMS4 504 aaKnown RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 TLR5O60602 858 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 NBNO60934 754 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 IPO13O94829 963 aaKnown RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 HMBSP08397 361 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 HOXB8P17481 243 aaPredicted RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 PRAMEP78395 509 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 TBL3Q12788 808 aaKnown RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 GPNMBQ14956 572 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 ANKS3Q6ZW76 656 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 DBF4BQ8NFT6 615 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 GPR150Q8NGU9 434 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 OR6P1Q8NGX9 317 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 FAR2Q96K12 515 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 SEMA3CQ99985 751 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 SEZ6LQ9BYH1 1024 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 ACSS2Q9NR19 701 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 CORO1CQ9ULV4 474 aaPredicted RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 POMPQ9Y244 141 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 NEMP1O14524 444 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 CCDC166P0CW27 439 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 ACVRL1P37023 503 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 EPHB1P54762 984 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 DUSP4Q13115 394 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 SH2D4BQ5SQS7 431 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 C16orf89Q6UX73 402 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 PTAR1Q7Z6K3 402 aaPredicted RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 SLC22A9Q8IVM8 553 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 RAET1EQ8TD07 263 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 IFT43Q96FT9 208 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 ZNF184Q99676 751 aaPredicted RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 LBHD1Q9BQE6 289 aaPredicted RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 CCSER2Q9H7U1 834 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 EML4Q9HC35 981 aaKnown RBP15.15■□□□□ 0.02
LDLR-202ENST00000455727 HTTP42858 3142 aa15.15■□□□□ 0.02
LDLR-202ENST00000455727 F5H5T6 163 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 HOXA2O43364 376 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 ARSDP51689 593 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 BFSP2Q13515 415 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 CYLC2Q14093 348 aaPredicted RBP15.14■□□□□ 0.01
LDLR-202ENST00000455727 RTP2Q5QGT7 225 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 FAM45BPQ6NSW5 357 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 CIR1Q86X95 450 aaPredicted RBP15.14■□□□□ 0.01
LDLR-202ENST00000455727 KIRREL3Q8IZU9 778 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 CRIPAKQ8N1N5 446 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 KYQ8NBH2 561 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 FAM45AQ8TCE6 357 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 MIEF2Q96C03 454 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 CFHR5Q9BXR6 569 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 OSBPL1AQ9BXW6 950 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 MAGEH1Q9H213 219 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 CYP4F11Q9HBI6 524 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 VPS28Q9UK41 221 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 PHF24Q9UPV7 400 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 SLC38A8A6NNN8 435 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 A8MT66 165 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 GALTP07902 379 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 ETFBP38117 255 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 MRPS35P82673 323 aaKnown RBP15.14■□□□□ 0.01
LDLR-202ENST00000455727 KLC1Q07866 573 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 CCNIQ14094 377 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 ZNF235Q14590 738 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 IRGCQ6NXR0 463 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 CEP70Q8NHQ1 597 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 SHKBP1Q8TBC3 707 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 BRSK1Q8TDC3 778 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 MYEOVQ96EZ4 313 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 MRPL9Q9BYD2 267 aaKnown RBP15.14■□□□□ 0.01
LDLR-202ENST00000455727 ZBTB26Q9HCK0 441 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 DNMT3LQ9UJW3 386 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 LRFN2Q9ULH4 789 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 PPM1HQ9ULR3 514 aa15.14■□□□□ 0.01
LDLR-202ENST00000455727 TTC24A2A3L6 582 aaPredicted RBP15.13■□□□□ 0.01
LDLR-202ENST00000455727 ZMPSTE24O75844 475 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 SMNDC1O75940 238 aaKnown RBP eCLIP15.13■□□□□ 0.01
LDLR-202ENST00000455727 JUNP05412 331 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms