RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ZNF276Q8N554 614 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 EBF3Q9H4W6 596 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 VRTNQ9H8Y1 702 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 IMPAD1Q9NX62 359 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 AHDC1Q5TGY3 1603 aaPredicted RBP16.73■□□□□ 0.27
TCOF1-206ENST00000445265 ITM2AO43736 263 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 RGS20O76081 388 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 STAU1O95793 577 aaKnown RBP16.73■□□□□ 0.27
TCOF1-206ENST00000445265 PIK3CGP48736 1102 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 NDUFV1P49821 464 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 DAB2P98082 770 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 MPP1Q00013 466 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 PGS1Q32NB8 556 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 ZBED2Q9BTP6 218 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 PDLIM7Q9NR12 457 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 CD3EAPO15446 510 aaKnown RBP16.73■□□□□ 0.27
TCOF1-206ENST00000445265 SEC22BO75396 215 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 PPP3CCP48454 512 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 IL5RAQ01344 420 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 GRIK3Q13003 919 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 PTPRNQ16849 979 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 UBAP2Q5T6F2 1119 aaKnown RBP16.73■□□□□ 0.27
TCOF1-206ENST00000445265 SETD9Q8NE22 299 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 MATN3O15232 486 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 PEX6Q13608 980 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 DLG2Q15700 870 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 CXCL17Q6UXB2 119 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 ZFP42Q96MM3 310 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
TCOF1-206ENST00000445265 ZNF395Q9H8N7 513 aaPredicted RBP16.72■□□□□ 0.27
TCOF1-206ENST00000445265 CAPN15O75808 1086 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 AQP4P55087 323 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 RRM2BQ7LG56 351 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 UNC5BQ8IZJ1 945 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 SPATA22Q8NHS9 363 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 GLMNQ92990 594 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 TMEM169Q96HH4 297 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 C8orf4Q9NR00 106 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 CAND1Q86VP6 1230 aaKnown RBP16.72■□□□□ 0.27
TCOF1-206ENST00000445265 OR4L1Q8NH43 312 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 LPGAT1Q92604 370 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 SLC7A6OSQ96CW6 309 aaPredicted RBP16.72■□□□□ 0.27
TCOF1-206ENST00000445265 OPTCQ9UBM4 332 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 NR2E3Q9Y5X4 410 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 MAST2Q6P0Q8 1798 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 A0A0J9YYE9 177 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 KCNU1A8MYU2 1149 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 PRIM2P49643 509 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 LRRC74AQ0VAA2 488 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 TMEM26Q6ZUK4 368 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 GALNT15Q8N3T1 639 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 TEPSINQ96N21 525 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 MLPHQ9BV36 600 aaPredicted RBP16.72■□□□□ 0.27
TCOF1-206ENST00000445265 ACSS2Q9NR19 701 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 ZNF358Q9NW07 568 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 RBPJLQ9UBG7 517 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 BTRCQ9Y297 605 aa16.72■□□□□ 0.27
TCOF1-206ENST00000445265 YJEFN3A6XGL0 299 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 RFPL1O75677 317 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 GHRHRQ02643 423 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 TUSC3Q13454 348 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 ESRP1Q6NXG1 681 aaKnown RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 C8orf59Q8N0T1 100 aaPredicted RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 ATG16L2Q8NAA4 619 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 RNF217Q8TC41 542 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 C19orf60Q96EN9 201 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 PCED1BQ96HM7 432 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 PCYT2Q99447 389 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 SLC25A51Q9H1U9 297 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 USP29Q9HBJ7 922 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 OXSMQ9NWU1 459 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 SLC17A6Q9P2U8 582 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 MANSC4A6NHS7 340 aaPredicted RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 H3BMM5 538 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 BRCC3P46736 316 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 ARHGAP1Q07960 439 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 TRIM25Q14258 630 aaKnown RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 ACAP2Q15057 778 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 HIST2H2ACQ16777 129 aaPredicted RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 SPDYE7PQ495Y7 208 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 HIST2H2AA3Q6FI13 130 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 DNAJC14Q6Y2X3 702 aaPredicted RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 GPRIN3Q6ZVF9 776 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 LENG1Q96BZ8 264 aaPredicted RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 EMILIN2Q9BXX0 1053 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 FAM126AQ9BYI3 521 aaPredicted RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 DYRK4Q9NR20 520 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 TMEM161AQ9NX61 479 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 KCNH1O95259 989 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 ITGB6P18564 788 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 ATP5C1P36542 298 aaKnown RBP16.71■□□□□ 0.27
TCOF1-206ENST00000445265 C21orf59P57076 290 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 ADHFE1Q8IWW8 467 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 SFRP1Q8N474 314 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 NAT14Q8WUY8 206 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 MKS1Q9NXB0 559 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 SPASTQ9UBP0 616 aa16.71■□□□□ 0.27
TCOF1-206ENST00000445265 RECQL5O94762 991 aaPredicted RBP16.71■□□□□ 0.26
TCOF1-206ENST00000445265 ST8SIA6P61647 398 aa16.71■□□□□ 0.26
TCOF1-206ENST00000445265 RUNX1T1Q06455 604 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms