RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CHP1Q99653 195 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 CINPQ9BW66 212 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-203ENST00000444440 IP6K2Q9UHH9 426 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 URB1O60287 2271 aaKnown RBP10.96□□□□□ -0.66
SF3A1-203ENST00000444440 SMG1Q96Q15 3661 aaKnown RBP10.95□□□□□ -0.66
SF3A1-203ENST00000444440 A0A0U1RQS6 177 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 A8MX80 341 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 K7ESM1 405 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 SCAMP1O15126 338 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 JUNDP17535 347 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 ARL4AP40617 200 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 LIG3P49916 1009 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 SCNN1BP51168 640 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 ADKP55263 362 aaKnown RBP10.95□□□□□ -0.66
SF3A1-203ENST00000444440 CDH6P55285 790 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 CYP4F3Q08477 520 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 C1orf61Q13536 156 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 DPYSL3Q14195 570 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 TCEA2Q15560 299 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 SLC18A3Q16572 532 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 DEFB133Q30KQ1 61 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 BOLA3Q53S33 107 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 TMCO4Q5TGY1 634 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 NCBP2-AS2Q69YL0 99 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 SPECC1LQ69YQ0 1117 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 TMCO3Q6UWJ1 677 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 ZSCAN30Q86W11 494 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 DCP2Q8IU60 420 aaKnown RBP10.95□□□□□ -0.66
SF3A1-203ENST00000444440 VSTM4Q8IW00 320 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 GALNT15Q8N3T1 639 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 HCAR2Q8TDS4 363 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 IFT43Q96FT9 208 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 ZNF641Q96N77 438 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-203ENST00000444440 SMIM14Q96QK8 99 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 PSKH2Q96QS6 385 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 TUBGCP5Q96RT8 1024 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 LRRC61Q9BV99 259 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 CLPBQ9H078 707 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 CCDC86Q9H6F5 360 aaKnown RBP10.95□□□□□ -0.66
SF3A1-203ENST00000444440 SPTLC3Q9NUV7 552 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 ZNHIT6Q9NWK9 470 aaKnown RBP10.95□□□□□ -0.66
SF3A1-203ENST00000444440 NLGN3Q9NZ94 848 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 ATP8A1Q9Y2Q0 1164 aa10.95□□□□□ -0.66
SF3A1-203ENST00000444440 MYO1FO00160 1098 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 AQP9O43315 295 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 PROSCO94903 275 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 SERPINA4P29622 427 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 ZNF135P52742 658 aaPredicted RBP10.94□□□□□ -0.66
SF3A1-203ENST00000444440 HNRNPKP61978 463 aaKnown RBP eCLIP10.94□□□□□ -0.66
SF3A1-203ENST00000444440 BCL2L1Q07817 233 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 NSUN2Q08J23 767 aaKnown RBP eCLIP10.94□□□□□ -0.66
SF3A1-203ENST00000444440 ELP6Q0PNE2 266 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 TRAF2Q12933 501 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 TARDBPQ13148 414 aaKnown RBP eCLIP10.94□□□□□ -0.66
SF3A1-203ENST00000444440 RFTN1Q14699 578 aaPredicted RBP10.94□□□□□ -0.66
SF3A1-203ENST00000444440 BRAT1Q6PJG6 821 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 LIPIQ6XZB0 460 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 TMPRSS12Q86WS5 348 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 PHACTR4Q8IZ21 702 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 LZTR1Q8N653 840 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 OR8K1Q8NGG5 319 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 PCDH19Q8TAB3 1148 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 FAM174AQ8TBP5 190 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 LMX1AQ8TE12 382 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 RFFLQ8WZ73 363 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 MGME1Q9BQP7 344 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 ATP13A3Q9H7F0 1226 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 NOD2Q9HC29 1040 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 ABHD10Q9NUJ1 306 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 DONSONQ9NYP3 566 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 CTTNBP2NLQ9P2B4 639 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 SEPT3Q9UH03 358 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 RAXQ9Y2V3 346 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 OR1A2Q9Y585 309 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 PCDHGC4Q9Y5F7 938 aa10.94□□□□□ -0.66
SF3A1-203ENST00000444440 TMEM110-MUSTN1A8MSY1 372 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 HTRA2O43464 458 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-203ENST00000444440 MFAP3LO75121 409 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 PCCBP05166 539 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 C1SP09871 688 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 CKMT1AP12532 417 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 XPAP23025 273 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-203ENST00000444440 AP1S1P61966 158 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 SLC10A2Q12908 348 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-203ENST00000444440 KRT81Q14533 505 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 INPP5AQ14642 412 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 GRM3Q14832 879 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 LRRC14Q15048 493 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 AGERQ15109 404 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 ALG11Q2TAA5 492 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 PRRT3Q5FWE3 981 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 GUSBP11Q6P575 273 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 MACC1Q6ZN28 852 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 DPPA4Q7L190 304 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 ATPAF2Q8N5M1 289 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 PQLC3Q8N755 202 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 FAM181AQ8N9Y4 354 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 TSACCQ96A04 125 aaPredicted RBP10.93□□□□□ -0.66
SF3A1-203ENST00000444440 PDXPQ96GD0 296 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 ZNF599Q96NL3 588 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms