RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 LBPP18428 481 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 ZNF549Q6P9A3 640 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 POTEHQ6S545 545 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 C17orf64Q86WR6 236 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 TCP10LQ8TDR4 215 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 PALMDQ9NP74 551 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 SEMA3GQ9NS98 782 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 ITGA2P17301 1181 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 ATP13A5Q4VNC0 1218 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 OLFML2BQ68BL8 750 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 KIF2BQ8N4N8 673 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 ITFG1Q8TB96 612 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 NIFKQ9BYG3 293 aaKnown RBP11.28□□□□□ -0.6
FN1-211ENST00000443816 HAO1Q9UJM8 370 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 DDX3XO00571 662 aaKnown RBP eCLIP11.28□□□□□ -0.63e-72■■■□□ 16.3
FN1-211ENST00000443816 STX11O75558 287 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 ECDO95905 644 aaPredicted RBP11.28□□□□□ -0.6
FN1-211ENST00000443816 RARAP10276 462 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 S100GP29377 79 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 ICAM3P32942 547 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 CXCR3P49682 368 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 RAB10P61026 200 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 CSNK2BP67870 215 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 GAD2Q05329 585 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 INAQ16352 499 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 TRMT5Q32P41 509 aaKnown RBP11.28□□□□□ -0.6
FN1-211ENST00000443816 HSDL1Q3SXM5 330 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 NLGN2Q8NFZ4 835 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 ACBD6Q9BR61 282 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 YIPF3Q9GZM5 350 aa11.28□□□□□ -0.6
FN1-211ENST00000443816 ULK1O75385 1050 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 HGFP14210 728 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 ACADSP16219 412 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 MC4RP32245 332 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 CLCNKBP51801 687 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 CRHR2Q13324 411 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 ZACNQ401N2 412 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 SPDYCQ5MJ68 293 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 RIT1Q92963 219 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 KCNS3Q9BQ31 491 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 RABGEF1Q9UJ41 708 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 PCDHB11Q9Y5F2 797 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 MYH14Q7Z406 1995 aaKnown RBP11.27□□□□□ -0.6
FN1-211ENST00000443816 MCIDASD6RGH6 385 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 HOXC12P31275 282 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 NDUFAF6Q330K2 333 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 TRIM40Q6P9F5 258 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 REXO1L1PQ8IX06 675 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 MYOCQ99972 504 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 BATF3Q9NR55 127 aa11.27□□□□□ -0.6
FN1-211ENST00000443816 ASTN1O14525 1302 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 H7C0S8 307 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 ADRB2P07550 413 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 CCL5P13501 91 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 RPL21P46778 160 aaKnown RBP11.27□□□□□ -0.61
FN1-211ENST00000443816 CASP5P51878 434 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.27□□□□□ -0.61
FN1-211ENST00000443816 ZDHHC13Q8IUH4 622 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 DEFB107AQ8IZN7 70 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 USP6NLQ92738 828 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 SEPHS2Q99611 448 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 COX10Q12887 443 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 PTPRNQ16849 979 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 AAK1Q2M2I8 961 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 ANXA8L1Q5VT79 327 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 CNKSR3Q6P9H4 555 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 DHFR2Q86XF0 187 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 SUN3Q8TAQ9 357 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 SLC38A2Q96QD8 506 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 EBNA1BP2Q99848 306 aaKnown RBP11.27□□□□□ -0.61
FN1-211ENST00000443816 DUSP9Q99956 384 aaKnown RBP11.27□□□□□ -0.61
FN1-211ENST00000443816 C5orf60A6NFR6 353 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 PEX1O43933 1283 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 FAM20BO75063 409 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 ATP6V0D1P61421 351 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
FN1-211ENST00000443816 TMEM154Q6P9G4 183 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 MTDHQ86UE4 582 aaKnown RBP11.27□□□□□ -0.61
FN1-211ENST00000443816 ACMSDQ8TDX5 336 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 KAT5Q92993 513 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 MMADHCQ9H3L0 296 aaPredicted RBP11.27□□□□□ -0.61
FN1-211ENST00000443816 PCDH12Q9NPG4 1184 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 COPS7AQ9UBW8 275 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 ABHD14A-ACY1A0A1B0GW23 586 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 TMEM191CA6NGB0 347 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 CLDN4O14493 209 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 LYPLA2O95372 231 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 PFKMP08237 780 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 ITGB5P18084 799 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 IRAK1P51617 712 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 SEC13P55735 322 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 SIX5Q8N196 739 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 INPP4AQ96PE3 977 aaPredicted RBP11.27□□□□□ -0.61
FN1-211ENST00000443816 SLC4A9Q96Q91 983 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 IL12RB2Q99665 862 aa11.27□□□□□ -0.61
FN1-211ENST00000443816 N6AMT1Q9Y5N5 214 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms