RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 MAN2A1Q16706 1144 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 CCDC14Q49A88 953 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 COLEC12Q5KU26 742 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 PHF19Q5T6S3 580 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 TAF8Q7Z7C8 310 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 NOP9Q86U38 636 aaKnown RBP11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 FAM46DQ8NEK8 389 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 CASKIN2Q8WXE0 1202 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 TMEM159Q96B96 161 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 HMCESQ96FZ2 354 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 PDXPQ96GD0 296 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 EXOC2Q96KP1 924 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 CMKLR1Q99788 373 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 KLC2Q9H0B6 622 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 NDST4Q9H3R1 872 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 FOXJ2Q9P0K8 574 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 MFHAS1Q9Y4C4 1052 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 DAAM1Q9Y4D1 1078 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 FHOD1Q9Y613 1164 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 RNF215Q9Y6U7 377 aa11.7□□□□□ -0.54
CHRNA1-207ENST00000435083 MAST4O15021 2626 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 UNC13CQ8NB66 2214 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 PES1O00541 588 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 PPFIA2O75334 1257 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 PRKCSHP14314 528 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 GLB1P16278 677 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 WT1P19544 449 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 SUOXP51687 545 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 INO80DQ53TQ3 878 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 CFAP58Q5T655 872 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 KCTD16Q68DU8 428 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 DPY19L2P1Q6NXN4 242 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 SFTPA2Q8IWL1 248 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 CCDC185Q8N715 623 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 JOSD2Q8TAC2 188 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 GPT2Q8TD30 523 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 OR1E3Q8WZA6 343 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 RBM15Q96T37 977 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 SEMA3CQ99985 751 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 PCDH12Q9NPG4 1184 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 LRIT1Q9P2V4 623 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 APPL1Q9UKG1 709 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 NEU3Q9UQ49 428 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 HECTD1Q9ULT8 2610 aa11.69□□□□□ -0.54
CHRNA1-207ENST00000435083 ANKRD36A6QL64 1941 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 B4DGG1 531 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 C9orf172C9J069 976 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 LIG3P49916 1009 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 SRSF1Q07955 248 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 MTM1Q13496 603 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 CAMK4Q16566 473 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 UGP2Q16851 508 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 C14orf28Q4W4Y0 310 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 VWA3BQ502W6 1294 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 CERCAMQ5T4B2 595 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 KLHDC7AQ5VTJ3 777 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 ERAP2Q6P179 960 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 OGFOD3Q6PK18 319 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 ZNF574Q6ZN55 896 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 TMPRSS9Q7Z410 1059 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 SPRED1Q7Z699 444 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 PLA2G15Q8NCC3 412 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 JPH3Q8WXH2 748 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 DPEP2Q9H4A9 486 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 SUV39H2Q9H5I1 410 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 NOL6Q9H6R4 1146 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 MRPL40Q9NQ50 206 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 KIAA1468Q9P260 1216 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 LHX3Q9UBR4 397 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 MOSPD1Q9UJG1 213 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 DGKBQ9Y6T7 804 aa11.68□□□□□ -0.54
CHRNA1-207ENST00000435083 A0A1W2PQC6 194 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 TMEM202A6NGA9 273 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 C2CD4BA6NLJ0 364 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 RASA4BC9J798 803 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 CACNB4O00305 520 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 RASA4O43374 803 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 PRKCGP05129 697 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 PNLIPP16233 465 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 EPHB2P29323 1055 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 PTPN9P43378 593 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 YBEYP58557 167 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 CLCA4Q14CN2 919 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 CYTH1Q15438 398 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 MAP9Q49MG5 647 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 HSP90AA4PQ58FG1 418 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 TMEM164Q5U3C3 297 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 STRADAQ7RTN6 431 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 DTX1Q86Y01 620 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 SLITRK4Q8IW52 837 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 FAM114A1Q8IWE2 563 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 PYROXD2Q8N2H3 581 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 RTL3Q8N8U3 475 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 OR56A4Q8NGH8 313 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 HCAR2Q8TDS4 363 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 FAM172AQ8WUF8 416 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 SLC20A1Q8WUM9 679 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 HTR3CQ8WXA8 447 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 C11orf70Q9BRQ4 267 aa11.67□□□□□ -0.54
CHRNA1-207ENST00000435083 TMEM168Q9H0V1 697 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms