RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 NATD1Q8N6N6 113 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 COLGALT1Q8NBJ5 622 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 GRAPLQ8TC17 118 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 MFSD3Q96ES6 412 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 FCRL3Q96P31 734 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 HAPLN2Q9GZV7 340 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SYTL2Q9HCH5 934 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 AASDHPPTQ9NRN7 309 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 OXSMQ9NWU1 459 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 FNDC3AQ9Y2H6 1198 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 POLRMTO00411 1230 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 RFPL2O75678 378 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 TNNC2P02585 160 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 FMO4P31512 558 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 IL1RL1Q01638 556 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 INSCQ1MX18 579 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 CYP4V2Q6ZWL3 525 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 ANKRD13AQ8IZ07 590 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SLC43A3Q8NBI5 491 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 OR52K1Q8NGK4 314 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 OSCP1Q8WVF1 389 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 CENPNQ96H22 339 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 POLR3FQ9H1D9 316 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 COQ3Q9NZJ6 369 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 COL20A1Q9P218 1284 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 POLLQ9UGP5 575 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 ABT1Q9ULW3 272 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SCAF8Q9UPN6 1271 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 M0QYV0 167 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 TRIM24O15164 1050 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 DHX15O43143 795 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 EIF2S1P05198 315 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 ACTR2P61160 394 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 RPS6KA2Q15349 733 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 HDDC2Q7Z4H3 204 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 NT5DC4Q86YG4 428 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 LINC00116Q8NCU8 138 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 MCUQ8NE86 351 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 DNAJB14Q8TBM8 379 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 DEPDC7Q96QD5 511 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 VPS33BQ9H267 617 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 ST6GALNAC4Q9H4F1 302 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 RMND5AQ9H871 391 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 MRPL40Q9NQ50 206 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 IARS2Q9NSE4 1012 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 XPR1Q9UBH6 696 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 AASSQ9UDR5 926 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 DSEQ9UL01 958 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 CAB39Q9Y376 341 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SNX5Q9Y5X3 404 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 RAD54BQ9Y620 910 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SEC14L2O76054 403 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 ITGB6P18564 788 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 XPAP23025 273 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 NCS1P62166 190 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 YWHAEP62258 255 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 RFTN1Q14699 578 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 COLEC12Q5KU26 742 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 LIPMQ5VYY2 423 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 XAF1Q6GPH4 301 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 XYLT1Q86Y38 959 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 HMGCLL1Q8TB92 370 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 RNF145Q96MT1 663 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 BBS2Q9BXC9 721 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 CCM2LQ9NUG4 571 aaPredicted RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SNTG2Q9NY99 539 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 K7ERI5 159 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 NFIBO00712 420 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 TMCC2O75069 709 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 LSM8O95777 96 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 AGXTP21549 392 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 IL4RP24394 825 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SNRPFP62306 86 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 TAZQ16635 292 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 VPS26BQ4G0F5 336 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 DESI1Q6ICB0 168 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF280DQ6N043 979 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 NEK5Q6P3R8 708 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 B3GNT9Q6UX72 402 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 LRRC49Q8IUZ0 686 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 ELMOD2Q8IZ81 293 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 LSMEM2Q8N112 164 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 CPSF7Q8N684 471 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 GANCQ8TET4 914 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 SLC10A4Q96EP9 437 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 EMILIN2Q9BXX0 1053 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 AKIP1Q9NQ31 210 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 PLSCR3Q9NRY6 295 aa7.5□□□□□ -1.21
CPSF6-202ENST00000435070 OLA1Q9NTK5 396 aaKnown RBP7.5□□□□□ -1.21
CPSF6-202ENST00000435070 NME4O00746 187 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 CCNE2O96020 404 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 POLBP06746 335 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 PSMB4P28070 264 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 AP3M2P53677 418 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TKFCQ3LXA3 575 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 TRNP1Q6NT89 227 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 LYPD8Q6UX82 237 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 SPARTQ8N0X7 666 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 GOLM1Q8NBJ4 401 aa7.49□□□□□ -1.21
CPSF6-202ENST00000435070 PDPRQ8NCN5 879 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms