RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 CNTD1Q8N815 330 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 LPCAT1Q8NF37 534 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 SKA1Q96BD8 255 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 IFT43Q96FT9 208 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 SLC6A18Q96N87 628 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 VAT1Q99536 393 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 TLR10Q9BXR5 811 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 GLOD4Q9HC38 313 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 TM9SF3Q9HD45 589 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 PARD6AQ9NPB6 346 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 RSPH14Q9UHP6 348 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 SLC6A14Q9UN76 642 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 CHKBQ9Y259 395 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.63■□□□□ 0.09
TREX1-201ENST00000433541 TMEM131Q92545 1883 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 TCRBV7S2A1N4TA0A589 114 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 TSPAN11A1L157 253 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 IGLON5A6NGN9 336 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 TRAFD1O14545 582 aaPredicted RBP15.62■□□□□ 0.09
TREX1-201ENST00000433541 LZTS3O60299 673 aaPredicted RBP15.62■□□□□ 0.09
TREX1-201ENST00000433541 MMP20O60882 483 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 ZNF189O75820 626 aaPredicted RBP15.62■□□□□ 0.09
TREX1-201ENST00000433541 PGLSO95336 258 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 FGGP02679 453 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 ELFN1P0C7U0 828 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 CTPS1P17812 591 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 NFKB1P19838 968 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 NUDT1P36639 197 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 CSNK1EP49674 416 aaKnown RBP15.62■□□□□ 0.09
TREX1-201ENST00000433541 GNG11P61952 73 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 NIPAL4Q0D2K0 466 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 STAT4Q14765 748 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 LONRF2Q1L5Z9 754 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 PLA2G2CQ5R387 149 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 ITPRIPL1Q6GPH6 555 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 NAPEPLDQ6IQ20 393 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 CCDC70Q6NSX1 233 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 USP45Q70EL2 814 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 ZSWIM9Q86XI8 627 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 SLC13A5Q86YT5 568 aaPredicted RBP15.62■□□□□ 0.09
TREX1-201ENST00000433541 MAIP1Q8WWC4 291 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 ATG4AQ8WYN0 398 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 RMDN1Q96DB5 314 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 ECHDC3Q96DC8 303 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 TEKT5Q96M29 485 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 EDEM2Q9BV94 578 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 C1QTNF7Q9BXJ2 289 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 SLC17A9Q9BYT1 436 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 SLC25A51Q9H1U9 297 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 PCDH9Q9HC56 1237 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 FZD3Q9NPG1 666 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 FSCN3Q9NQT6 498 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 UBP1Q9NZI7 540 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 TRHDEQ9UKU6 1024 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 PHTF1Q9UMS5 762 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 ZFR2Q9UPR6 939 aaKnown RBP15.62■□□□□ 0.09
TREX1-201ENST00000433541 DMTF1Q9Y222 760 aa15.62■□□□□ 0.09
TREX1-201ENST00000433541 R3HDM2Q9Y2K5 976 aaKnown RBP15.62■□□□□ 0.09
TREX1-201ENST00000433541 DMDP11532 3685 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 GOLGA8CPA6NN73 597 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 PRAMEF26H0Y7S4 382 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 RIOK3O14730 519 aaKnown RBP15.61■□□□□ 0.09
TREX1-201ENST00000433541 LATO43561 262 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 PMPCBO75439 489 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 TM7SF2O76062 418 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 PAK4O96013 591 aaPredicted RBP15.61■□□□□ 0.09
TREX1-201ENST00000433541 SYPP08247 313 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 CYP2A6P11509 494 aaPredicted RBP15.61■□□□□ 0.09
TREX1-201ENST00000433541 HNRNPA2B1P22626 353 aaKnown RBP15.61■□□□□ 0.09
TREX1-201ENST00000433541 RACK1P63244 317 aaKnown RBP15.61■□□□□ 0.09
TREX1-201ENST00000433541 IRX4P78413 519 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 KLF1Q13351 362 aaPredicted RBP15.61■□□□□ 0.09
TREX1-201ENST00000433541 SNX1Q13596 522 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 ARHGEF7Q14155 803 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 ZNF284Q2VY69 593 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 ALG1LQ6GMV1 187 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 SLC23A3Q6PIS1 610 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 LAYNQ6UX15 382 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 ZSCAN30Q86W11 494 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 ZNF567Q8N184 647 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 ARRDC2Q8TBH0 407 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 NSMCE3Q96MG7 304 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 TDRD1Q9BXT4 1180 aaKnown RBP15.61■□□□□ 0.09
TREX1-201ENST00000433541 ADGRE3Q9BY15 652 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 ZNF148Q9UQR1 794 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 COQ6Q9Y2Z9 468 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 USP34Q70CQ2 3546 aa15.61■□□□□ 0.09
TREX1-201ENST00000433541 PIEZO1Q92508 2521 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 CACNA1EQ15878 2313 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 A0A1B0GVT2 93 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 AREL1O15033 823 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 HTRA2O43464 458 aaPredicted RBP15.6■□□□□ 0.09
TREX1-201ENST00000433541 MT-CYBP00156 380 aaPredicted RBP15.6■□□□□ 0.09
TREX1-201ENST00000433541 ATP1A1P05023 1023 aaKnown RBP15.6■□□□□ 0.09
TREX1-201ENST00000433541 PDHA1P08559 390 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 ALPIP09923 528 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 CD38P28907 300 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 ACTN2P35609 894 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 MMP12P39900 470 aa15.6■□□□□ 0.09
TREX1-201ENST00000433541 LIG3P49916 1009 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms