RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PPARGP37231 505 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 COMPP49747 757 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SSBP2P81877 361 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 LAMB3Q13751 1172 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 DUSP6Q16828 381 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SOWAHAQ2M3V2 549 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 USP41Q3LFD5 358 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 ESCO2Q56NI9 601 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 C6orf141Q5SZD1 244 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 GKAP1Q5VSY0 366 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 KIAA0930Q6ICG6 404 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF280DQ6N043 979 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 LRRC8EQ6NSJ5 796 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 CPLX2Q6PUV4 134 aaKnown RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 TSSK4Q6SA08 328 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SEPT14Q6ZU15 432 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 DENND6AQ8IWF6 608 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC35F3Q8IY50 421 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 DPP10Q8N608 796 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC44A5Q8NCS7 719 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 GJC3Q8NFK1 279 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 CCDC34Q96HJ3 373 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC41A2Q96JW4 573 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 OR2A14Q96R47 310 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SEPT5Q99719 369 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 FAM110AQ9BQ89 295 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 WDR77Q9BQA1 342 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLF1Q9BQI6 1058 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 CDT1Q9H211 546 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 PDE7BQ9NP56 450 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 MSRB1Q9NZV6 116 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 CTNNAL1Q9UBT7 734 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 MORF4L1Q9UBU8 362 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 FBXL17Q9UF56 701 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 CNOT8Q9UFF9 292 aaKnown RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 PCDHA12Q9UN75 941 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 MTMR6Q9Y217 621 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 FAM96BQ9Y3D0 163 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 NFE2L3Q9Y4A8 694 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 LSM4Q9Y4Z0 139 aaKnown RBP3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 ARHGEF40Q8TER5 1519 aa3.27□□□□□ -1.89
HMGB1P27-201ENST00000431429 NESP48681 1621 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 OR2A25A4D2G3 310 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 GAGE12JA6NER3 117 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 EIF3CLB5ME19 914 aaKnown RBP3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 SNAP23O00161 211 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 UBE2CO00762 179 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 ADAM20O43506 726 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 MMP2P08253 660 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 MMP3P08254 477 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 GNLYP22749 145 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 MCM3P25205 808 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 CHATP28329 748 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 ACADLP28330 430 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 EPHB2P29323 1055 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 CIITAP33076 1130 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 NNMTP40261 264 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 GDF5P43026 501 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 RASSF2P50749 326 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 HSD17B4P51659 736 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 PMS2P54278 862 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 ID2Q02363 134 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 GHRHRQ02643 423 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 GOLGA8DPQ0D2H9 430 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 LPIN1Q14693 890 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 VEPH1Q14D04 833 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 PPP2R5BQ15173 497 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 ADIPOQQ15848 244 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 CCDC96Q2M329 555 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 TCTN1Q2MV58 587 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 COL28A1Q2UY09 1125 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 CDONQ4KMG0 1287 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 C6orf10Q5SRN2 563 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 GARNL3Q5VVW2 1013 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 HIST2H2BCQ6DN03 193 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 HIST2H2BDQ6DRA6 164 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 DBX2Q6ZNG2 339 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 CLEC17AQ6ZS10 378 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 LINGO2Q7L985 606 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 TDRPQ86YL5 185 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 WDR63Q8IWG1 891 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 SFTPA2Q8IWL1 248 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 RNF168Q8IYW5 571 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 LRRC57Q8N9N7 239 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 IL17RCQ8NAC3 791 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC16A11Q8NCK7 471 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 ENGASEQ8NFI3 743 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 RASSF8Q8NHQ8 419 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC22A18Q96BI1 424 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 FBXL8Q96CD0 374 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 CALML4Q96GE6 196 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF333Q96JL9 665 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 QTRT1Q9BXR0 403 aaKnown RBP3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 PRSS22Q9GZN4 317 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 KIF9Q9HAQ2 790 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 MAGEE1Q9HCI5 957 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 LTB4R2Q9NPC1 389 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 ADARB2Q9NS39 739 aaKnown RBP3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 MARCH4Q9P2E8 410 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 NFKBIL1Q9UBC1 381 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms