RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 GPR15P49685 360 aa13.47□□□□□ -0.25
USP42-203ENST00000426246 RAB27AP51159 221 aa13.47□□□□□ -0.25
USP42-203ENST00000426246 NIPAL4Q0D2K0 466 aa13.47□□□□□ -0.25
USP42-203ENST00000426246 NEDD8Q15843 81 aa13.47□□□□□ -0.25
USP42-203ENST00000426246 PKDCCQ504Y2 493 aa13.47□□□□□ -0.25
USP42-203ENST00000426246 C6orf10Q5SRN2 563 aa13.47□□□□□ -0.25
USP42-203ENST00000426246 TXNDC5Q8NBS9 432 aaKnown RBP13.47□□□□□ -0.25
USP42-203ENST00000426246 VPS33AQ96AX1 596 aa13.47□□□□□ -0.25
USP42-203ENST00000426246 ZNF512Q96ME7 567 aaPredicted RBP13.47□□□□□ -0.25
USP42-203ENST00000426246 AFF4Q9UHB7 1163 aaKnown RBP13.47□□□□□ -0.25
USP42-203ENST00000426246 G3V2L1 256 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 PSMD12O00232 456 aaPredicted RBP13.46□□□□□ -0.25
USP42-203ENST00000426246 PAGE1O75459 146 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 LRPAP1P30533 357 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 CD151P48509 253 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 PRKAA1Q13131 559 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 TRAF7Q6Q0C0 670 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 C3orf58Q8NDZ4 430 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 HSFY1Q96LI6 401 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 RPRD1AQ96P16 312 aaPredicted RBP13.46□□□□□ -0.25
USP42-203ENST00000426246 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 NAT9Q9BTE0 207 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 PNPLA8Q9NP80 782 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 IPO11Q9UI26 975 aaKnown RBP13.46□□□□□ -0.25
USP42-203ENST00000426246 RAP2CQ9Y3L5 183 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 ZCWPW2A0A1B0GU75 182 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 MGEA5O60502 916 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 SH3BGRLO75368 114 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 RNASEH2AO75792 299 aaKnown RBP13.46□□□□□ -0.25
USP42-203ENST00000426246 MTHFD1P11586 935 aaKnown RBP13.46□□□□□ -0.25
USP42-203ENST00000426246 OR1G1P47890 313 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 USP46P62068 366 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 CDKL1Q00532 357 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 NRG1Q02297 640 aaPredicted RBP13.46□□□□□ -0.25
USP42-203ENST00000426246 STRADAQ7RTN6 431 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 IFT43Q96FT9 208 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 LRCH3Q96II8 777 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 VPS50Q96JG6 964 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 SEPT5Q99719 369 aaPredicted RBP13.46□□□□□ -0.25
USP42-203ENST00000426246 GORASP1Q9BQQ3 440 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 SLC39A8Q9C0K1 460 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 TRMT13Q9NUP7 481 aaKnown RBP13.46□□□□□ -0.25
USP42-203ENST00000426246 GDAP2Q9NXN4 497 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 UBAP1Q9NZ09 502 aa13.46□□□□□ -0.25
USP42-203ENST00000426246 J3KR12 359 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 IRF1P10914 325 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 CPB1P15086 417 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 WNT3AP56704 352 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 RAB10P61026 200 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 PTPRRQ15256 657 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 ZC3HC1Q86WB0 502 aaKnown RBP13.46□□□□□ -0.26
USP42-203ENST00000426246 METTL23Q86XA0 190 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 SPATA2LQ8IUW3 424 aaPredicted RBP13.46□□□□□ -0.26
USP42-203ENST00000426246 FAM47BQ8NA70 645 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 TBATAQ96M53 351 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 OLFM3Q96PB7 478 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 CCDC90BQ9GZT6 254 aa13.46□□□□□ -0.26
USP42-203ENST00000426246 ANGPT2O15123 496 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 MAGEB3O15480 346 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 MAN1A2O60476 641 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 GABRB3P28472 473 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 DPP6P42658 865 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 CCNG1P51959 295 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 ACLYP53396 1101 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 DAOAP59103 153 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 TBCCQ15814 346 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 PSMD5Q16401 504 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 SLC39A12Q504Y0 691 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 TIGD5Q53EQ6 642 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 EPGNQ6UW88 154 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 UNC93AQ86WB7 457 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 OR10Q1Q8NGQ4 319 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 ACTRT2Q8TDY3 377 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 DQX1Q8TE96 717 aaKnown RBP13.45□□□□□ -0.26
USP42-203ENST00000426246 KLHL32Q96NJ5 620 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 MRPL46Q9H2W6 279 aaKnown RBP13.45□□□□□ -0.26
USP42-203ENST00000426246 AP4S1Q9Y587 144 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 TSHRP16473 764 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 CD52P31358 61 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 HTRA3P83110 453 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 TUBB3Q13509 450 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 FAM26DQ5JW98 314 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 RAP1GAP2Q684P5 730 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 C14orf80Q86SX3 495 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 CLVS1Q8IUQ0 354 aaPredicted RBP13.45□□□□□ -0.26
USP42-203ENST00000426246 TTC39CQ8N584 583 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 NSUN5Q96P11 429 aaKnown RBP13.45□□□□□ -0.26
USP42-203ENST00000426246 IL22Q9GZX6 179 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 ADNPQ9H2P0 1102 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 FAM105AQ9NUU6 356 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 OXSMQ9NWU1 459 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 ITGB1P05556 798 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 HNRNPCP07910 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
USP42-203ENST00000426246 FAM58BPP0C7Q3 252 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 SLC35E2BP0CK96 405 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 DSC3Q14574 896 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 TBCELQ5QJ74 424 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 HERC6Q8IVU3 1022 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 LILRA2Q8N149 483 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms