RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 PNMA8CA0A1B0GUJ8 204 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 PDE5AO76074 875 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 CHSY3Q70JA7 882 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 LINGO1Q96FE5 620 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 VPS35Q96QK1 796 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 DGCR6LQ9BY27 220 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 NECTIN3Q9NQS3 549 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 MYH9P35579 1960 aaKnown RBP11.27□□□□□ -0.61
PTCH1-205ENST00000418258 PDE9AO76083 593 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 VIPP01282 170 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 HGFP14210 728 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 PAX3P23760 479 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 TEAD4Q15561 434 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 LSM12Q3MHD2 195 aaKnown RBP11.27□□□□□ -0.61
PTCH1-205ENST00000418258 TREML2Q5T2D2 321 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 RBFAQ8N0V3 343 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 ZNF75CPQ92670 426 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-205ENST00000418258 CERS2Q96G23 380 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 ZNF607Q96SK3 696 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 BTBD10Q9BSF8 475 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 PLK2Q9NYY3 685 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 MMP3P08254 477 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 CCNA2P20248 432 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 SLC6A2P23975 617 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 MC4RP32245 332 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 UGT1A5P35504 534 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 RPL14P50914 215 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 CYP4F2P78329 520 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 CDK16Q00536 496 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 CYP4F3Q08477 520 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 DGKZQ13574 1117 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 ARMC3Q5W041 872 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 PIGZQ86VD9 579 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TSPAN14Q8NG11 270 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 ARNTL2Q8WYA1 636 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 ABCG8Q9H221 673 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 RPL38P63173 70 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 IKBIPQ70UQ0 350 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 OFCC1Q8IZS5 231 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 ZCCHC9Q8N567 271 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 BHLHE22Q8NFJ8 381 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 HNRNPLLQ8WVV9 542 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 HSFY1Q96LI6 401 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 SLC25A23Q9BV35 468 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 CNTNAP1P78357 1384 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 PEX11AO75192 247 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 EPHX1P07099 455 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 ZSCAN5DPP0CG00 497 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 GRM3Q14832 879 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 KCNA10Q16322 511 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 NRF1Q16656 503 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 LEMD2Q8NC56 503 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 DNAJB14Q8TBM8 379 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 FNDC11Q9BVV2 318 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 LACRTQ9GZZ8 138 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 DEC1Q9P2X7 70 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 CLCN5P51795 746 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 SRP54P61011 504 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 SPIBQ01892 262 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 WDR93Q6P2C0 686 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TAF8Q7Z7C8 310 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 VSIG10LQ86VR7 867 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 PTGR2Q8N8N7 351 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 OR4L1Q8NH43 312 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 MAGEE2Q8TD90 523 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 SMG7Q92540 1137 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 Q96MT0 163 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 WRAP53Q9BUR4 548 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 RWDD3Q9Y3V2 267 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 ITGA2P17301 1181 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 GLUD2P49448 558 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 PKNOX1P55347 436 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 FKBP1BP68106 108 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TAB1Q15750 504 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 AKIRIN2Q53H80 203 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 GPRIN3Q6ZVF9 776 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TRPV3Q8NET8 790 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 AARSD1Q9BTE6 412 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 COPG2Q9UBF2 871 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 OGDHLQ9ULD0 1010 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 MAFO75444 373 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TFEBP19484 476 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TCEA1P23193 301 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 LGALS3BPQ08380 585 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 DGCR6Q14129 220 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TMPRSS11BQ86T26 416 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 OR52K2Q8NGK3 314 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 ING5Q8WYH8 240 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 PPP3R2Q96LZ3 170 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 SNRNP25Q9BV90 132 aaKnown RBP11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TBC1D14Q9P2M4 693 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 HPSEQ9Y251 543 aa11.26□□□□□ -0.61
PTCH1-205ENST00000418258 TOP3BO95985 862 aaKnown RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 PROCP04070 461 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 GRIA4P48058 902 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 UGT2B15P54855 530 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 NR1D2Q14995 579 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms