RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 KCTD4Q8WVF5 259 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 CDRT15Q96T59 188 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 NOD2Q9HC29 1040 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 CNGB3Q9NQW8 809 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 MAPK10P53779 464 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 EPS8Q12929 822 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 MCMBPQ9BTE3 642 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 SLC39A8Q9C0K1 460 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 CAB39LQ9H9S4 337 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 MORF4L1Q9UBU8 362 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 RHPN2P1A8MT19 583 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 C2orf27AQ580R0 203 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 IZUMO2Q6UXV1 221 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 ZCCHC9Q8N567 271 aaKnown RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 PDZD7Q9H5P4 517 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 SGK2Q9HBY8 427 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 ELOVL2Q9NXB9 296 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 FCF1Q9Y324 198 aaKnown RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 ABHD14A-ACY1A0A1B0GW23 586 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 ENPP3O14638 875 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 LGR5O75473 907 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 TSPAN19P0C672 248 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 HK2P52789 917 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 INAQ16352 499 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 POLNQ7Z5Q5 900 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 DNAJB14Q8TBM8 379 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 C6orf62Q9GZU0 229 aaPredicted RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 SPRTNQ9H040 489 aaPredicted RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 LIASO43766 372 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 CYP1A2P05177 515 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 UBE2R2Q712K3 238 aaPredicted RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 ZNF605Q86T29 641 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 OR6Y1Q8NGX8 325 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 METTL21AQ8WXB1 218 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 ZNF75CPQ92670 426 aaPredicted RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 NMUR1Q9HB89 426 aa11.4□□□□□ -0.58
TTC28-201ENST00000397906 PHPT1Q9NRX4 125 aaPredicted RBP11.4□□□□□ -0.58
TTC28-201ENST00000397906 RPL14P50914 215 aaKnown RBP11.4□□□□□ -0.59
TTC28-201ENST00000397906 RAB10P61026 200 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 SLC25A52Q3SY17 297 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 SRLQ86TD4 932 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 GALNT13Q8IUC8 556 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 PRSS58Q8IYP2 241 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 FAM71AQ8IYT1 594 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 ZNF354BQ96LW1 612 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 UGT2B28Q9BY64 529 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 AGXT2Q9BYV1 514 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 MRPL39Q9NYK5 338 aaKnown RBP11.4□□□□□ -0.59
TTC28-201ENST00000397906 ULK1O75385 1050 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 TFPIP10646 304 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 PMEPA1Q969W9 287 aa11.4□□□□□ -0.59
TTC28-201ENST00000397906 CCNE2O96020 404 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 FAM187BQ17R55 369 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 OTOP3Q7RTS5 596 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 RBFAQ8N0V3 343 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 BRINP2Q9C0B6 783 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 SLITRK2Q9H156 845 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 ANGPT4Q9Y264 503 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 GLYATL1P3A0A0U1RQE8 302 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 TP73O15350 636 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 CCNYL3P0C7X3 344 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 GPM6BQ13491 265 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 CHST15Q7LFX5 561 aaPredicted RBP11.39□□□□□ -0.59
TTC28-201ENST00000397906 HID1Q8IV36 788 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 ZFP28Q8NHY6 868 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 NEUROD4Q9HD90 331 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 ACSS2Q9NR19 701 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 E9PAM4 449 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 CCL5P13501 91 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 HGFP14210 728 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 NT5DC1Q5TFE4 455 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 UBOX5O94941 541 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 TIE1P35590 1138 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 GRIA4P48058 902 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 FMO1Q01740 532 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 DEF8Q6ZN54 512 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 FAM220AQ7Z4H9 259 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 LRRC52Q8N7C0 313 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 BCLAF3A2AJT9 711 aaKnown RBP11.39□□□□□ -0.59
TTC28-201ENST00000397906 ATG13O75143 517 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 CCND3P30281 292 aaPredicted RBP11.39□□□□□ -0.59
TTC28-201ENST00000397906 SMYD1Q8NB12 490 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 ASZ1Q8WWH4 475 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 NELL1Q92832 810 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 COPS8Q99627 209 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 C11orf84Q9BUA3 381 aaPredicted RBP11.39□□□□□ -0.59
TTC28-201ENST00000397906 GRIP2Q9C0E4 1043 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 ADAM30Q9UKF2 790 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 PRMT3O60678 531 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 PTPN2P17706 415 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 PRKG2Q13237 762 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 VITQ6UXI7 678 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 SLC9A9Q8IVB4 645 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 LNX1Q8TBB1 728 aaPredicted RBP11.39□□□□□ -0.59
TTC28-201ENST00000397906 FEM1CQ96JP0 617 aa11.39□□□□□ -0.59
TTC28-201ENST00000397906 ZNF670Q9BS34 389 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms