RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 GOLPH3LQ9H4A5 285 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ZDHHC6Q9H6R6 413 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 WDCPQ9H6R7 721 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ANLNQ9NQW6 1124 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 PIGVQ9NUD9 493 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 TMEM51Q9NW97 253 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 MPP6Q9NZW5 540 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 HECAQ9UBI9 543 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF212Q9UDV6 495 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 GPR34Q9UPC5 381 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 KCTD3Q9Y597 815 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 SHANK1Q9Y566 2161 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 TMEM110-MUSTN1A8MSY1 372 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 TCP11X1B4DZS4 312 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 TM7SF2O76062 418 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 CD160O95971 181 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 F9P00740 461 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 HSP90AA1P07900 732 aaKnown RBP9.52□□□□□ -0.89
NEDD9-203ENST00000397378 FGF3P11487 239 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-203ENST00000397378 PNLIPP16233 465 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 DNA2P51530 1060 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 HK3P52790 923 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 MC1RQ01726 317 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 SLC6A3Q01959 620 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 ZXDCQ2QGD7 858 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-203ENST00000397378 CCDC40Q4G0X9 1142 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 FAM183BPQ6ZVS7 135 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 ENOSF1Q7L5Y1 443 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 SPRED1Q7Z699 444 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 VPS36Q86VN1 386 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 GKN2Q86XP6 184 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 TP53INP2Q8IXH6 220 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 UNC5BQ8IZJ1 945 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 TP53I13Q8NBR0 393 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-203ENST00000397378 CCDC112Q8NEF3 446 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 GPR156Q8NFN8 814 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 STARD8Q92502 1023 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 ART4Q93070 314 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 NT5C3BQ969T7 300 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 VOPP1Q96AW1 172 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 C5orf34Q96MH7 638 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 SPON2Q9BUD6 331 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 EFHD1Q9BUP0 239 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 OSBPL1AQ9BXW6 950 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 SLC29A3Q9BZD2 475 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 EDEM3Q9BZQ6 932 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 UNKQ9C0B0 810 aaKnown RBP9.52□□□□□ -0.89
NEDD9-203ENST00000397378 RDH14Q9HBH5 336 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 ATP13A1Q9HD20 1204 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 UBE2TQ9NPD8 197 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-203ENST00000397378 ACP6Q9NPH0 428 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 APPL1Q9UKG1 709 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 ITM2BQ9Y287 266 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 FCF1Q9Y324 198 aaKnown RBP9.52□□□□□ -0.89
NEDD9-203ENST00000397378 MAP4K5Q9Y4K4 846 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 PCDHGA3Q9Y5H0 932 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 B3GALT1Q9Y5Z6 326 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 KCNMB2Q9Y691 235 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 MED13LQ71F56 2210 aa9.52□□□□□ -0.89
NEDD9-203ENST00000397378 LOC101059948A0A1B0GTJ6 334 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 PSMA7O14818 248 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 RASGRP1O95267 797 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 POP4O95707 220 aaKnown RBP9.51□□□□□ -0.89
NEDD9-203ENST00000397378 GLB1P16278 677 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 SNX16P57768 344 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 GNA12Q03113 381 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 ARHGEF7Q14155 803 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 ALG11Q2TAA5 492 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 FOXR2Q6PJQ5 311 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 KDELC2Q7Z4H8 507 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 PIM3Q86V86 326 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 ZDHHC17Q8IUH5 632 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 HID1Q8IV36 788 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 TRIM59Q8IWR1 403 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 MCEMP1Q8IX19 187 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 NRSN1Q8IZ57 195 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 TTC13Q8NBP0 860 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 C1orf131Q8NDD1 294 aaKnown RBP9.51□□□□□ -0.89
NEDD9-203ENST00000397378 DHTKD1Q96HY7 919 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-203ENST00000397378 FAM81BQ96LP2 452 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 TM6SF2Q9BZW4 377 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 SCAND2PQ9GZW5 306 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-203ENST00000397378 MBNL1Q9NR56 388 aaKnown RBP9.51□□□□□ -0.89
NEDD9-203ENST00000397378 STAP1Q9ULZ2 295 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 PHTF1Q9UMS5 762 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 SLC5A6Q9Y289 635 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 SNX10Q9Y5X0 201 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 FBN3Q75N90 2809 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 TNRC6AQ8NDV7 1962 aaKnown RBP9.51□□□□□ -0.89
NEDD9-203ENST00000397378 HIVEP3Q5T1R4 2406 aa9.51□□□□□ -0.89
NEDD9-203ENST00000397378 PDZD2O15018 2839 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 PCNX1Q96RV3 2341 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 BECN2A8MW95 431 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 HGSO14964 777 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 CPNE6O95741 557 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 GSRP00390 522 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 ERBB2P04626 1255 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 UGT2B4P06133 528 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms