RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TM6SF2Q9BZW4 377 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 ATP13A3Q9H7F0 1226 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 MRM3Q9HC36 420 aaKnown RBP10.66□□□□□ -0.7
NUP98-205ENST00000397007 SPO11Q9Y5K1 396 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 NUMA1Q14980 2115 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 NPIPB15A6NHN6 443 aaPredicted RBP10.66□□□□□ -0.7
NUP98-205ENST00000397007 UPK3BL1B0FP48 263 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 UPK3BL2E5RIL1 263 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 LDB2O43679 373 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 C1SP09871 688 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 FDFT1P37268 417 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 ZNF140P52738 457 aaPredicted RBP10.66□□□□□ -0.7
NUP98-205ENST00000397007 TSSK4Q6SA08 328 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 ZNF765Q7L2R6 523 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 HOOK3Q86VS8 718 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 RELL1Q8IUW5 271 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 MMAAQ8IVH4 418 aaKnown RBP10.66□□□□□ -0.7
NUP98-205ENST00000397007 PRCCQ92733 491 aaPredicted RBP10.66□□□□□ -0.7
NUP98-205ENST00000397007 ETNK1Q9HBU6 452 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 PAK5Q9P286 719 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 ANKRD66B4E2M5 251 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 CD86P42081 329 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 WASP42768 502 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 STC1P52823 247 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 ST8SIA6P61647 398 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 PLK5Q496M5 336 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 TTC16Q8NEE8 873 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 TXLNGYQ9BZA5 131 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 TREX1Q9NSU2 369 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 TMPRSS11EQ9UL52 423 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 TRPM6Q9BX84 2022 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 DCHS1Q96JQ0 3298 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 CD6P30203 668 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 ACSL1P33121 698 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 NUMBP49757 651 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 PPP2CBP62714 309 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 PPP2CAP67775 309 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 BNC1Q01954 994 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 PTPRRQ15256 657 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 ANKRD22Q5VYY1 191 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 CRTC1Q6UUV9 634 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 KLHL32Q96NJ5 620 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 SMIM14Q96QK8 99 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 DDX47Q9H0S4 455 aaKnown RBP10.65□□□□□ -0.7
NUP98-205ENST00000397007 SCUBE2Q9NQ36 999 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 SPATA6Q9NWH7 488 aaPredicted RBP10.65□□□□□ -0.7
NUP98-205ENST00000397007 FAM153AQ9UHL3 310 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 KRIT1O00522 736 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 DLL1O00548 723 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 EPN2O95208 641 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 MLNP12872 115 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 NEK3P51956 506 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 CDK16Q00536 496 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 OLIG2Q13516 323 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 CNGA3Q16281 694 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 DARS2Q6PI48 645 aaKnown RBP10.65□□□□□ -0.7
NUP98-205ENST00000397007 JAMLQ86YT9 394 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 TSTD1Q8NFU3 115 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 PEX13Q92968 403 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 LOXL4Q96JB6 756 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 PCDH12Q9NPG4 1184 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 CNOT6Q9ULM6 557 aaKnown RBP10.65□□□□□ -0.7
NUP98-205ENST00000397007 HCN4Q9Y3Q4 1203 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 ZNF292O60281 2723 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 TRBV5-4A0A0C4DH59 114 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 METTL12A8MUP2 240 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 AXIN1O15169 862 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 HEXIM1O94992 359 aaKnown RBP10.65□□□□□ -0.7
NUP98-205ENST00000397007 NDST3O95803 873 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 TNFRSF8P28908 595 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 CA5AP35218 305 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 HNF1BP35680 557 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 CETN2P41208 172 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 FNTBP49356 437 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 XIAPP98170 497 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 FAM46CQ5VWP2 391 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 LIPIQ6XZB0 460 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 KANSL1Q7Z3B3 1105 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 ABI3BPQ7Z7G0 1075 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 DSG4Q86SJ6 1040 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 OR2T34Q8NGX1 318 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 COX14Q96I36 57 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 TWSG1Q9GZX9 223 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 PILRBQ9UKJ0 227 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 PCDHGC4Q9Y5F7 938 aa10.65□□□□□ -0.7
NUP98-205ENST00000397007 RGSL1A5PLK6 1076 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 FAM187AA6NFU0 413 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 PLK4O00444 970 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 DNALI1O14645 258 aaPredicted RBP10.64□□□□□ -0.71
NUP98-205ENST00000397007 RAD51CO43502 376 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 TSPAN6O43657 245 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 PPFIA2O75334 1257 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 TRIM23P36406 574 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 WNT3AP56704 352 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 LMNB2Q03252 620 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 HENMT1Q5T8I9 393 aaKnown RBP10.64□□□□□ -0.71
NUP98-205ENST00000397007 KIAA1161Q6NSJ0 714 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 LRRC8BQ6P9F7 803 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 PELI3Q8N2H9 469 aa10.64□□□□□ -0.71
NUP98-205ENST00000397007 NOA1Q8NC60 698 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms