RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 GNA12Q03113 381 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 IL10RBQ08334 325 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 RALGPS1Q5JS13 557 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.01■□□□□ 0.47
SREBF1-204ENST00000395756 NYNRINQ9P2P1 1898 aaKnown RBP18■□□□□ 0.47
SREBF1-204ENST00000395756 HOXA2O43364 376 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 SORBS2O94875 1100 aaKnown RBP18■□□□□ 0.47
SREBF1-204ENST00000395756 LAMB3Q13751 1172 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 PARP15Q460N3 678 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 KIAA0930Q6ICG6 404 aaPredicted RBP18■□□□□ 0.47
SREBF1-204ENST00000395756 DIS3LQ8TF46 1054 aaKnown RBP18■□□□□ 0.47
SREBF1-204ENST00000395756 ANKRD49Q8WVL7 239 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 IGSF21Q96ID5 467 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 CDH19Q9H159 772 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 MUC3BQ9H195 1237 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 ATP13A1Q9HD20 1204 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 ZNF195O14628 629 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 KRT36O76013 467 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 IGLV3-27P01718 113 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 ARSAP15289 507 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 TUFMP49411 452 aaKnown RBP18■□□□□ 0.47
SREBF1-204ENST00000395756 EPHB1P54762 984 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 CCDC6Q16204 474 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 ACSBG2Q5FVE4 666 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 TMEM198Q66K66 360 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 CRIPAKQ8N1N5 446 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 NSMCE3Q96MG7 304 aa18■□□□□ 0.47
SREBF1-204ENST00000395756 NOP53Q9NZM5 478 aaKnown RBP18■□□□□ 0.47
SREBF1-204ENST00000395756 GOLGA8CPA6NN73 597 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 PRAMEF11O60813 436 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 ATXN1LP0C7T5 689 aaKnown RBP17.99■□□□□ 0.47
SREBF1-204ENST00000395756 KCNA5P22460 613 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 ALDH1A3P47895 512 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 APLP1P51693 650 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 GPR158Q5T848 1215 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 TMCO4Q5TGY1 634 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 LIPMQ5VYY2 423 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 ZYG11AQ6WRX3 759 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 HIPK4Q8NE63 616 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 NAT14Q8WUY8 206 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 CCDC124Q96CT7 223 aaKnown RBP17.99■□□□□ 0.47
SREBF1-204ENST00000395756 SLC22A12Q96S37 553 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 PRKD2Q9BZL6 878 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 VPS45Q9NRW7 570 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 GTSE1Q9NYZ3 720 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 TRPM5Q9NZQ8 1165 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 RANBP2P49792 3224 aaKnown RBP17.99■□□□□ 0.47
SREBF1-204ENST00000395756 MT-CO1P00395 513 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 TFEBP19484 476 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 FRG1Q14331 258 aaKnown RBP17.99■□□□□ 0.47
SREBF1-204ENST00000395756 FBXO48Q5FWF7 155 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 EZH1Q92800 747 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-204ENST00000395756 PRICKLE1Q96MT3 831 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-204ENST00000395756 FAM167BQ9BTA0 163 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 RNPEPL1Q9HAU8 725 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 KIAA0100Q14667 2235 aaKnown RBP17.99■□□□□ 0.47
SREBF1-204ENST00000395756 CASP8AP2Q9UKL3 1982 aa17.99■□□□□ 0.47
SREBF1-204ENST00000395756 UBA6A0AVT1 1052 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 LDB2O43679 373 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 ZBTB14O43829 449 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 SNAP91O60641 907 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 GOT2P00505 430 aaKnown RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 PDHA1P08559 390 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 SERPINF2P08697 491 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 ZDHHC11BP0C7U3 371 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 CCL5P13501 91 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 IKBKEQ14164 716 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 SLC8B1Q6J4K2 584 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 TMPRSS6Q8IU80 811 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 CNTN4Q8IWV2 1026 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 KLHDC8BQ8IXV7 354 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 EFHBQ8N7U6 833 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 TMEM169Q96HH4 297 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 CINPQ9BW66 212 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 POMKQ9H5K3 350 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 BPIFA1Q9NP55 256 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 PLK2Q9NYY3 685 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 KLHL2O95198 593 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 RHOCP08134 193 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 HMGA1P17096 107 aaKnown RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 CDKN2DP55273 166 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 OXCT1P55809 520 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 TWF1Q12792 350 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 RCN1Q15293 331 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 RABGAP1LQ5R372 815 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 HECTD2Q5U5R9 776 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 CILP2Q8IUL8 1156 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 TXNDC5Q8NBS9 432 aaKnown RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 B4GALNT2Q8NHY0 566 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 GPR78Q96P69 363 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 ALG9Q9H6U8 611 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 MTRRQ9UBK8 725 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 C5orf42Q9H799 3197 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 SCN5AQ14524 2016 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 HNRNPCL1O60812 293 aaKnown RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 STC2O76061 302 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 PDE5AO76074 875 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 GNRH1P01148 92 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 PMLP29590 882 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms