RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PRICKLE1Q96MT3 831 aaPredicted RBP16.42■□□□□ 0.22
VPS16-203ENST00000380469 TMEM209Q96SK2 561 aa16.42■□□□□ 0.22
VPS16-203ENST00000380469 CACNA2D2Q9NY47 1150 aa16.42■□□□□ 0.22
VPS16-203ENST00000380469 CCDC167Q9P0B6 97 aa16.42■□□□□ 0.22
VPS16-203ENST00000380469 VWA7Q9Y334 891 aa16.42■□□□□ 0.22
VPS16-203ENST00000380469 HS3ST4Q9Y661 456 aa16.42■□□□□ 0.22
VPS16-203ENST00000380469 MYLKQ15746 1914 aa16.42■□□□□ 0.22
VPS16-203ENST00000380469 GPR182O15218 404 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 RNASEH2AO75792 299 aaKnown RBP16.41■□□□□ 0.22
VPS16-203ENST00000380469 PLK1P53350 603 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 C1QTNF8P60827 252 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 TRAP1Q12931 704 aaKnown RBP16.41■□□□□ 0.22
VPS16-203ENST00000380469 LRP8Q14114 963 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 SLC5A9Q2M3M2 681 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 IL23RQ5VWK5 629 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 C14orf80Q86SX3 495 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 HASPINQ8TF76 798 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 ZNF696Q9H7X3 374 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 NT5MQ9NPB1 228 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 HACD3Q9P035 362 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 FNIP2Q9P278 1114 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 APPL1Q9UKG1 709 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 TRAF6Q9Y4K3 522 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 RGS2P41220 211 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 SLC14A2Q15849 920 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.41■□□□□ 0.22
VPS16-203ENST00000380469 PTAR1Q7Z6K3 402 aaPredicted RBP16.41■□□□□ 0.22
VPS16-203ENST00000380469 OR6P1Q8NGX9 317 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 ATP6V1E2Q96A05 226 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 IMP4Q96G21 291 aaKnown RBP16.41■□□□□ 0.22
VPS16-203ENST00000380469 TRMOQ9BU70 441 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 SLC25A23Q9BV35 468 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 SPAG4Q9NPE6 437 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 NUDT5Q9UKK9 219 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 SARDHQ9UL12 918 aa16.41■□□□□ 0.22
VPS16-203ENST00000380469 M0QZQ0 153 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 OR6B1O95007 311 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 PAPSS2O95340 614 aaPredicted RBP16.4■□□□□ 0.22
VPS16-203ENST00000380469 CHRNA1P02708 482 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 TFAP2AP05549 437 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 C8BP07358 591 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 IMPDH1P20839 514 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 CD86P42081 329 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 INHBCP55103 352 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 MLLT6P55198 1093 aaPredicted RBP16.4■□□□□ 0.22
VPS16-203ENST00000380469 NRG1Q02297 640 aaPredicted RBP16.4■□□□□ 0.22
VPS16-203ENST00000380469 PPP1R3AQ16821 1122 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 SPRYD7Q5W111 196 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 PAOXQ6QHF9 649 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 RPS27LQ71UM5 84 aaKnown RBP16.4■□□□□ 0.22
VPS16-203ENST00000380469 GALNT7Q86SF2 657 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 SCD5Q86SK9 330 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 CILP2Q8IUL8 1156 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 RIN3Q8TB24 985 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 RSPH1Q8WYR4 309 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 NMD3Q96D46 503 aaKnown RBP16.4■□□□□ 0.22
VPS16-203ENST00000380469 UBXN10Q96LJ8 280 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 SERPINB11Q96P15 392 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 SENP6Q9GZR1 1112 aaPredicted RBP16.4■□□□□ 0.22
VPS16-203ENST00000380469 PCDHAC1Q9H158 963 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 TNFRSF12AQ9NP84 129 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 VPS45Q9NRW7 570 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 WASH4PA8MWX3 477 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 FBP2O00757 339 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 STAMBPO95630 424 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 PAX3P23760 479 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 PGFP49763 221 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 CDKL1Q00532 357 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 MYBPC1Q00872 1141 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 RHDQ02161 417 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 MGAT5BQ3V5L5 792 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 ARTNQ5T4W7 220 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 MARC1Q5VT66 337 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 IYDQ6PHW0 289 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 RBM44Q6ZP01 1051 aaKnown RBP16.4■□□□□ 0.22
VPS16-203ENST00000380469 HMGCLL1Q8TB92 370 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 DDI1Q8WTU0 396 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 LPGAT1Q92604 370 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 C1orf74Q96LT6 269 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 ATP13A1Q9HD20 1204 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 CROTQ9UKG9 612 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 PCDHGB4Q9UN71 923 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 PCDHGB5Q9Y5G0 923 aa16.4■□□□□ 0.22
VPS16-203ENST00000380469 NYNRINQ9P2P1 1898 aaKnown RBP16.4■□□□□ 0.22
VPS16-203ENST00000380469 BPTFQ12830 3046 aa16.39■□□□□ 0.22
VPS16-203ENST00000380469 ARHGEF37A1IGU5 675 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 H0YJX3 145 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 MRASO14807 208 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 TRIM24O15164 1050 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 SLC7A4O43246 635 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 KPNA6O60684 536 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 PENKP01210 267 aaPredicted RBP16.39■□□□□ 0.21
VPS16-203ENST00000380469 NDST2P52849 883 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 PRAMEP78395 509 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 ALG9Q9H6U8 611 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 OSER1Q9NX31 292 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 A0A1W2PQH9 124 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 TNFRSF10BO14763 440 aa16.39■□□□□ 0.21
VPS16-203ENST00000380469 NRP2O60462 931 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms