RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	ZNF534	Q76KX8	674 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	C12orf76	Q8N812	135 aa	Predicted RBP	11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	PPHLN1	Q8NEY8	458 aa	Known RBP	11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	TCEAL4	Q96EI5	215 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	MFSD3	Q96ES6	412 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	TLE6	Q9H808	572 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	SLC12A4	Q9UP95	1085 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	LRRC42	Q9Y546	428 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	IGLV3-27	P01718	113 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	S100B	P04271	92 aa	Predicted RBP	11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	MLN	P12872	115 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	PTPN2	P17706	415 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	TEAD2	Q15562	447 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	KLHDC10	Q6PID8	442 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	DCLK2	Q8N568	766 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	NAT9	Q9BTE0	207 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	POLR1E	Q9GZS1	481 aa	Known RBP	11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	EIF2B3	Q9NR50	452 aa	Known RBP	11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	DKK3	Q9UBP4	350 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	NEU3	Q9UQ49	428 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	LAMA3	Q16787	3333 aa		11.78	□□□□□ -0.52
LMO7-204	ENST00000377499	DRGX	A6NNA5	263 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	PIRT	P0C851	137 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	NRG1	Q02297	640 aa	Predicted RBP	11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	SERINC3	Q13530	473 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	TMCO4	Q5TGY1	634 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	IRGC	Q6NXR0	463 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	OR6P1	Q8NGX9	317 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	BLOC1S5	Q8TDH9	187 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	TMEM237	Q96Q45	408 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	TGS1	Q96RS0	853 aa	Known RBP	11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	RNPEPL1	Q9HAU8	725 aa		11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	MRPS23	Q9Y3D9	190 aa	Known RBP	11.77	□□□□□ -0.52
LMO7-204	ENST00000377499	RANBP2	P49792	3224 aa	Known RBP	11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	BUD23	O43709	281 aa	Known RBP	11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	TMPRSS15	P98073	1019 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	IL10RB	Q08334	325 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	THOC5	Q13769	683 aa	Known RBP	11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	BBS7	Q8IWZ6	715 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	SH3RF2	Q8TEC5	729 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	FCRL5	Q96RD9	977 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	IL12RB2	Q99665	862 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	CENPK	Q9BS16	269 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	MAGEH1	Q9H213	219 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	IARS2	Q9NSE4	1012 aa	Known RBP	11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	NMRK1	Q9NWW6	199 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	CCDC195	A0A1B0GUA6	201 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	FAM47DP	A6NHR8	397 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	SNAP91	O60641	907 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	LILRB3	O75022	631 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	ARHGEF15	O94989	841 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	RHO	P08100	348 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	SNRPA	P09012	282 aa	Known RBP	11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	COL6A2	P12110	1019 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	MZF1	P28698	734 aa	Predicted RBP	11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	NPY2R	P49146	381 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	EMC10	Q5UCC4	262 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	ZNF449	Q6P9G9	518 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	ELMSAN1	Q6PJG2	1045 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	TMEM150A	Q86TG1	271 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	TRABD2A	Q86V40	505 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	HJURP	Q8NCD3	748 aa	Predicted RBP	11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	LRRC8C	Q8TDW0	803 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	SLC46A2	Q9BY10	475 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	IL22	Q9GZX6	179 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	IL21	Q9HBE4	155 aa		11.77	□□□□□ -0.53
LMO7-204	ENST00000377499	COPE	O14579	308 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	GJB3	O75712	270 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	OR6B1	O95007	311 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	VAPB	O95292	243 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	STAMBP	O95630	424 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	SERPINF2	P08697	491 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	MAGEA6	P43360	314 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	EPHB1	P54762	984 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	ZNF33A	Q06730	810 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	APLF	Q8IW19	511 aa	Predicted RBP	11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	TM6SF2	Q9BZW4	377 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	SLC25A51	Q9H1U9	297 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	C12orf65	Q9H3J6	166 aa	Known RBP	11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	PPCS	Q9HAB8	311 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	SLC28A3	Q9HAS3	691 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	SELENON	Q9NZV5	590 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	SEPT3	Q9UH03	358 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	IGLV3-10	A0A075B6K4	115 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	WASH4P	A8MWX3	477 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	SPECC1L-ADORA2A	F8WAN1	911 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	AP3B1	O00203	1094 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	TCEA3	O75764	348 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	PBX2	P40425	430 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	ARFIP2	P53365	341 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	LSAMP	Q13449	338 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	GALNT3	Q14435	633 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	SNX30	Q5VWJ9	437 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	KLC3	Q6P597	504 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	PRR23C	Q6ZRP0	262 aa		11.76	□□□□□ -0.53
LMO7-204	ENST00000377499	OR52K2	Q8NGK3	314 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms