RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ARL13AQ5H913 290 aaPredicted RBP18.41■□□□□ 0.54
RXRB-202ENST00000374685 LRRC8EQ6NSJ5 796 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 PHTF2Q8N3S3 785 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 SH3RF2Q8TEC5 729 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 OLFM1Q99784 485 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 TRPC7Q9HCX4 862 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 TREX1Q9NSU2 369 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 H7C4K7 107 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 SERPINA6P08185 405 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 PTPRRQ15256 657 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 LINGO4Q6UY18 593 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 PIM3Q86V86 326 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 OR13C4Q8NGS5 318 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 HEXDCQ8WVB3 486 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 DNAJC9Q8WXX5 260 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 WBP2Q969T9 261 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 PHF21BQ96EK2 531 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 OR52B2Q96RD2 323 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 CCDC106Q9BWC9 280 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 TAGLN3Q9UI15 199 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 DNMT3LQ9UJW3 386 aa18.41■□□□□ 0.54
RXRB-202ENST00000374685 PATJQ8NI35 1801 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 C2orf78A6NCI8 922 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 COCHO43405 550 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 SBK3P0C264 359 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 HNRNPLP14866 589 aaKnown RBP eCLIP18.4■□□□□ 0.54
RXRB-202ENST00000374685 TSPAN8P19075 237 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 KRT72Q14CN4 511 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 CCDC6Q16204 474 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 TSTD2Q5T7W7 516 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 FOXB2Q5VYV0 432 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 LRRC43Q8N309 656 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 OR13J1Q8NGT2 312 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 DNAJC1Q96KC8 554 aaKnown RBP18.4■□□□□ 0.54
RXRB-202ENST00000374685 VN1R3Q9BXE9 311 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 C1QTNF1Q9BXJ1 281 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 ELAC1Q9H777 363 aaKnown RBP18.4■□□□□ 0.54
RXRB-202ENST00000374685 PACSIN3Q9UKS6 424 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 DOCK4Q8N1I0 1966 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 TRAFD1O14545 582 aaPredicted RBP18.4■□□□□ 0.54
RXRB-202ENST00000374685 KRT36O76013 467 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 TLE2Q04725 743 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.4■□□□□ 0.54
RXRB-202ENST00000374685 ARRDC2Q8TBH0 407 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 ISL2Q96A47 359 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 CCDC124Q96CT7 223 aaKnown RBP18.4■□□□□ 0.54
RXRB-202ENST00000374685 RMDN1Q96DB5 314 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 OXSMQ9NWU1 459 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 NSMCE4AQ9NXX6 385 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 PCDHB12Q9Y5F1 795 aa18.4■□□□□ 0.54
RXRB-202ENST00000374685 MIA3Q5JRA6 1907 aa18.39■□□□□ 0.54
RXRB-202ENST00000374685 WASH4PA8MWX3 477 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 DLX3O60479 287 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 PENKP01210 267 aaPredicted RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 CORO1AP31146 461 aaKnown RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 SERPINB5P36952 375 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 RGRP47804 291 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 EPHB1P54762 984 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 ELAVL2Q12926 359 aaKnown RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 TUBB3Q13509 450 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 MYBPC3Q14896 1274 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 TRIM60Q495X7 471 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 TMC7Q7Z402 723 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 MCMBPQ9BTE3 642 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 TUBB6Q9BUF5 446 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 MRPL9Q9BYD2 267 aaKnown RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 POLR1EQ9GZS1 481 aaKnown RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 GPAMQ9HCL2 828 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 DNAAF2Q9NVR5 837 aaKnown RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 IL37Q9NZH6 218 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 ATP11BQ9Y2G3 1177 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 FAM92AA1XBS5 289 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 KLKB1P03952 638 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 JUNP05412 331 aaKnown RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 CCDC166P0CW27 439 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 NRG1Q02297 640 aaPredicted RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 USP41Q3LFD5 358 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 RALGPS1Q5JS13 557 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 C2CD4AQ8NCU7 369 aaPredicted RBP18.39■□□□□ 0.53
RXRB-202ENST00000374685 PHC3Q8NDX5 983 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 HIPK4Q8NE63 616 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 RNF38Q9H0F5 515 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 CDH19Q9H159 772 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 SCOCQ9UIL1 159 aa18.39■□□□□ 0.53
RXRB-202ENST00000374685 IGLV3-10A0A075B6K4 115 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 SORBS2O94875 1100 aaKnown RBP18.38■□□□□ 0.53
RXRB-202ENST00000374685 ARSAP15289 507 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 RCN1Q15293 331 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 ACSBG2Q5FVE4 666 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 KIAA0930Q6ICG6 404 aaPredicted RBP18.38■□□□□ 0.53
RXRB-202ENST00000374685 LRRC49Q8IUZ0 686 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 CFAP61Q8NHU2 1237 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 FAM192AQ9GZU8 254 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 ILKAPQ9H0C8 392 aaPredicted RBP18.38■□□□□ 0.53
RXRB-202ENST00000374685 GTSE1Q9NYZ3 720 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.38■□□□□ 0.53
RXRB-202ENST00000374685 ATXN10Q9UBB4 475 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 ZDHHC2Q9UIJ5 367 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 C5orf42Q9H799 3197 aa18.38■□□□□ 0.53
RXRB-202ENST00000374685 GREB1Q4ZG55 1949 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms