RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ARHGAP24Q8N264 748 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 PPHLN1Q8NEY8 458 aaKnown RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 DIS3LQ8TF46 1054 aaKnown RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 GAB3Q8WWW8 586 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 CLSTN3Q9BQT9 956 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 DDX18Q9NVP1 670 aaKnown RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 KCNK4Q9NYG8 393 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 BACE2Q9Y5Z0 518 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 TANC1Q9C0D5 1861 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 TTC24A2A3L6 582 aaPredicted RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 SEC24AO95486 1093 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 KITP10721 976 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 TACR2P21452 398 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 OR1E1P30953 314 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 SLC6A4P31645 630 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 ARRB2P32121 409 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 CD86P42081 329 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 PGGT1BP53609 377 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 ACTR3P61158 418 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 SERINC3Q13530 473 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 CNGA3Q16281 694 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 PARP15Q460N3 678 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 TRIM60Q495X7 471 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 NCCRP1Q6ZVX7 275 aaPredicted RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 NET1Q7Z628 596 aaPredicted RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 TTC7BQ86TV6 843 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 CRLF3Q8IUI8 442 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 TNS4Q8IZW8 715 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 ARRDC2Q8TBH0 407 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 TADA1Q96BN2 335 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 RHOJQ9H4E5 214 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 SLC39A10Q9ULF5 831 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 COL4A6Q14031 1691 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 LYPLA1O75608 230 aaPredicted RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 GJB5O95377 273 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 PARNO95453 639 aaKnown RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 MPOP05164 745 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 HMGA1P17096 107 aaKnown RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 TUFMP49411 452 aaKnown RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 NUMBP49757 651 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 KPNA1P52294 538 aaPredicted RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 IL10RBQ08334 325 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 ITKQ08881 620 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 ALYREFQ86V81 257 aaKnown RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 ZNF354CQ86Y25 554 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 CFAP52Q8N1V2 620 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 SLC25A41Q8N5S1 370 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.9□□□□□ -0.34
GPC3-201ENST00000370818 OR6Y1Q8NGX8 325 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 VPS45Q9NRW7 570 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 NSMCE4AQ9NXX6 385 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 DNMT3LQ9UJW3 386 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 ZNF840PA6NDX5 716 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 B2RBV5 119 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 GJB3O75712 270 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 PGM3O95394 542 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 UQCRBP14927 111 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 VCLP18206 1134 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 CD97P48960 835 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 MPP1Q00013 466 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 ZBTB16Q05516 673 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 TBL3Q12788 808 aaKnown RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 ASPHQ12797 758 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 CTBP1Q13363 440 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 CCDC153Q494R4 210 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 SFT2D3Q587I9 215 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 RBM44Q6ZP01 1051 aaKnown RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 MFSD6LQ8IWD5 586 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 FBXO27Q8NI29 283 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 PPP1R14CQ8TAE6 165 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 CEP295NLQ96MC4 621 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 ZNF512Q96ME7 567 aaPredicted RBP12.9□□□□□ -0.34
GPC3-201ENST00000370818 INIPQ9NRY2 104 aa12.9□□□□□ -0.34
GPC3-201ENST00000370818 G3V2L1 256 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 SIN3BO75182 1162 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 SERPINE1P05121 402 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 SLC1A6P48664 564 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 MAPKAPK2P49137 400 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 YBEYP58557 167 aaPredicted RBP12.89□□□□□ -0.35
GPC3-201ENST00000370818 TRMT5Q32P41 509 aaKnown RBP12.89□□□□□ -0.35
GPC3-201ENST00000370818 C5orf22Q49AR2 442 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 SLC44A4Q53GD3 710 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 KIAA0930Q6ICG6 404 aaPredicted RBP12.89□□□□□ -0.35
GPC3-201ENST00000370818 KLHDC10Q6PID8 442 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 TMPRSS6Q8IU80 811 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 LGI2Q8N0V4 545 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 TOX2Q96NM4 488 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 C1QTNF1Q9BXJ1 281 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 NMUR2Q9GZQ4 415 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 AFF4Q9UHB7 1163 aaKnown RBP12.89□□□□□ -0.35
GPC3-201ENST00000370818 MYLKQ15746 1914 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 A0A0D9SEW6 157 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 F5H5T6 163 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 MUSKO15146 869 aa12.89□□□□□ -0.35
GPC3-201ENST00000370818 COCHO43405 550 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms