RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 CCNB1P14635 433 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 ARRB1P49407 418 aaPredicted RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 CCT8P50990 548 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 VAV2P52735 878 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 NAP1L1P55209 391 aaKnown RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 CLDN2P57739 230 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 GBE1Q04446 702 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 ITKQ08881 620 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 FGL2Q14314 439 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 AGERQ15109 404 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 TRIP6Q15654 476 aaKnown RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 TAZQ16635 292 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 C11orf63Q6NUN7 778 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 ERAP2Q6P179 960 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 MFSD7Q6UXD7 560 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 Q6ZSR6 202 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 BZW1Q7L1Q6 419 aaKnown RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 DAAM2Q86T65 1068 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 SPATS2Q86XZ4 545 aaKnown RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 TMEM139Q8IV31 216 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 NAXDQ8IW45 347 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 RCOR2Q8IZ40 523 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 TXLNBQ8N3L3 684 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 PAF1Q8N7H5 531 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 PLD5Q8N7P1 536 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 TPCN2Q8NHX9 752 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 KIAA1524Q8TCG1 905 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 SETD7Q8WTS6 366 aaKnown RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 CENPTQ96BT3 561 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 CAMK1GQ96NX5 476 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 KLF6Q99612 283 aaPredicted RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 MGME1Q9BQP7 344 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 BRD8Q9H0E9 1235 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 NOD2Q9HC29 1040 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 NT5MQ9NPB1 228 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 FZD3Q9NPG1 666 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 HAUS2Q9NVX0 235 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 RBM22Q9NW64 420 aaKnown RBP eCLIP9.93□□□□□ -0.82
CD48-202ENST00000368046 GGT7Q9UJ14 662 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 SALL4Q9UJQ4 1053 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 PCOLCE2Q9UKZ9 415 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 ITM2BQ9Y287 266 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 CA5BQ9Y2D0 317 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 REXO2Q9Y3B8 237 aaKnown RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 PCDHGC4Q9Y5F7 938 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 HEY1Q9Y5J3 304 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 NUMA1Q14980 2115 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 POM121BA6NF01 834 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 A6NNZ2 444 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 TOR1BO14657 336 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 APOL1O14791 398 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 RAD51BO15315 384 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 YKT6O15498 198 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 CBFA2T3O75081 653 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 SOCS5O75159 536 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 NEBLO76041 1014 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 ITGAVP06756 1048 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 CDKN2BP42772 138 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 NR2C2P49116 596 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 LIG3P49916 1009 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 GSDMDP57764 484 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 MAXP61244 160 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 YPEL5P62699 121 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 FAM193AP78312 1265 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 KIF5AQ12840 1032 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 BNIP3Q12983 259 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 TFDP2Q14188 446 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 PDK1Q15118 436 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 SHBQ15464 509 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 LRRC73Q5JTD7 316 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 GCNT7Q6ZNI0 430 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 ZSWIM9Q86XI8 627 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 RFX6Q8HWS3 928 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 CCDC13Q8IYE1 715 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 KATNAL2Q8IYT4 538 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 ACRBPQ8NEB7 543 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 DENND6BQ8NEG7 585 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 OR13H1Q8NG92 308 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 EXD1Q8NHP7 514 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 SAP25Q8TEE9 199 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 HDAC11Q96DB2 347 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 IFT43Q96FT9 208 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 SCRN2Q96FV2 425 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 ZNF830Q96NB3 372 aaPredicted RBP9.92□□□□□ -0.82
CD48-202ENST00000368046 LGMNQ99538 433 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 CDC6Q99741 560 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 MYOCQ99972 504 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 C1QTNF7Q9BXJ2 289 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 POLR1EQ9GZS1 481 aaKnown RBP9.92□□□□□ -0.82
CD48-202ENST00000368046 LACRTQ9GZZ8 138 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 GOLPH3Q9H4A6 298 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 PCDH12Q9NPG4 1184 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 PHTF1Q9UMS5 762 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 ATP8A1Q9Y2Q0 1164 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 PPIL1Q9Y3C6 166 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 PCDHA3Q9Y5H8 950 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 PCDH15Q96QU1 1955 aa9.92□□□□□ -0.82
CD48-202ENST00000368046 LZTS3O60299 673 aaPredicted RBP9.91□□□□□ -0.82
CD48-202ENST00000368046 FZD6O60353 706 aa9.91□□□□□ -0.82
CD48-202ENST00000368046 JCHAINP01591 159 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms